(data stored in SCRATCH zone)

SWISSPROT: D5URK4_TSUPD

ID   D5URK4_TSUPD            Unreviewed;       443 AA.
AC   D5URK4;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   08-MAY-2019, entry version 33.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADG77057.1};
GN   OrderedLocusNames=Tpau_0416 {ECO:0000313|EMBL:ADG77057.1};
OS   Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /
OS   NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).
OC   Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae;
OC   Tsukamurella.
OX   NCBI_TaxID=521096 {ECO:0000313|EMBL:ADG77057.1, ECO:0000313|Proteomes:UP000001213};
RN   [1] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA   Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C.,
RA   Tapia R., Han C., Larimer F., Land M., Hauser L., Markowitz V.,
RA   Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Brambilla E.,
RA   Klenk H.-P., Eisen J.A.;
RT   "The complete chromosome of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADG77057.1, ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RX   PubMed=21886861;
RA   Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F.,
RA   Del Rio T.G., Goodwin L., Pitluck S., Liolios K., Huntemann M.,
RA   Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA   Palaniappan K., Tapia R., Han C., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Yasawong M., Brambilla E.M., Rohde M.,
RA   Sikorski J., Goker M., Detter J.C., Woyke T., Bristow J., Eisen J.A.,
RA   Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Tsukamurella paurometabola type strain
RT   (no. 33).";
RL   Stand. Genomic Sci. 4:342-351(2011).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001966; ADG77057.1; -; Genomic_DNA.
DR   RefSeq; WP_013125099.1; NC_014158.1.
DR   STRING; 521096.Tpau_0416; -.
DR   EnsemblBacteria; ADG77057; ADG77057; Tpau_0416.
DR   KEGG; tpr:Tpau_0416; -.
DR   eggNOG; ENOG41090MF; Bacteria.
DR   eggNOG; ENOG4111RAM; LUCA.
DR   OMA; GREDQHQ; -.
DR   OrthoDB; 1593423at2; -.
DR   BioCyc; TPAU521096:G1GKO-398-MONOMER; -.
DR   Proteomes; UP000001213; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR021424; PorA.
DR   Pfam; PF11271; PorA; 1.
PE   4: Predicted;
DR   PRODOM; D5URK4.
DR   SWISS-2DPAGE; D5URK4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001213};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001213};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     12     34       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    356    377       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   443 AA;  47631 MW;  C7A7BC5B45C6B66C CRC64;
     MAEGRSRLAR VIGPILIFLG VLLITSAIAG PAYVAGKLKT IPLDLDVTTV AQSVKPADSQ
     ADAEFPAKSL DLCSIGKQRA VVNEVSVKTQ TRTLVQSPSD KSTMTVQSGS SMVIPSIKTK
     GEPRHPELTN ANKGERPCDD GLVQAWVDRV SLDRETGAPT GKTSETVYSP GESAPAVKVA
     DRKGLQYRFP ADTSKENGKY SFYDLITRKN VALDFVEEKE VSGTNTLRLR GSQDWVDMST
     VRDGNDPTLG TVLTMPAGWW GIGGVDPKDD ITLNRWAKTD VELWVDPKTG IIVDQSLHYT
     QQFRLPAQVV PNTPKPVRDF KMDVFDAQQR WVDDTVRSQA EAAKSEQNKL AVAKTVVPIA
     GGVLGLIALG LGGFALFQGR TAPGGNGGGR RSDDGAAPTL PLDDDATAAA PTDDEPVTEA
     FNAQPKPDES QTEAIDLRNR DQH
//

If you have problems or comments...

PBIL Back to PBIL home page