(data stored in SCRATCH zone)

SWISSPROT: D5USU6_TSUPD

ID   D5USU6_TSUPD            Unreviewed;       303 AA.
AC   D5USU6;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   16-JAN-2019, entry version 43.
DE   SubName: Full=HhH-GPD family protein {ECO:0000313|EMBL:ADG77233.1};
GN   OrderedLocusNames=Tpau_0595 {ECO:0000313|EMBL:ADG77233.1};
OS   Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /
OS   NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).
OC   Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae;
OC   Tsukamurella.
OX   NCBI_TaxID=521096 {ECO:0000313|EMBL:ADG77233.1, ECO:0000313|Proteomes:UP000001213};
RN   [1] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA   Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C.,
RA   Tapia R., Han C., Larimer F., Land M., Hauser L., Markowitz V.,
RA   Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Brambilla E.,
RA   Klenk H.-P., Eisen J.A.;
RT   "The complete chromosome of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADG77233.1, ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RX   PubMed=21886861;
RA   Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F.,
RA   Del Rio T.G., Goodwin L., Pitluck S., Liolios K., Huntemann M.,
RA   Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA   Palaniappan K., Tapia R., Han C., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Yasawong M., Brambilla E.M., Rohde M.,
RA   Sikorski J., Goker M., Detter J.C., Woyke T., Bristow J., Eisen J.A.,
RA   Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Tsukamurella paurometabola type strain
RT   (no. 33).";
RL   Stand. Genomic Sci. 4:342-351(2011).
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DR   EMBL; CP001966; ADG77233.1; -; Genomic_DNA.
DR   RefSeq; WP_013125275.1; NC_014158.1.
DR   STRING; 521096.Tpau_0595; -.
DR   EnsemblBacteria; ADG77233; ADG77233; Tpau_0595.
DR   KEGG; tpr:Tpau_0595; -.
DR   eggNOG; ENOG4105CEN; Bacteria.
DR   eggNOG; COG1194; LUCA.
DR   HOGENOM; HOG000028742; -.
DR   KO; K03575; -.
DR   OMA; WNNAIME; -.
DR   OrthoDB; 1274533at2; -.
DR   BioCyc; TPAU521096:G1GKO-575-MONOMER; -.
DR   Proteomes; UP000001213; Chromosome.
DR   GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:InterPro.
DR   GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0006284; P:base-excision repair; IEA:InterPro.
DR   CDD; cd00056; ENDO3c; 1.
DR   Gene3D; 1.10.1670.10; -; 1.
DR   InterPro; IPR011257; DNA_glycosylase.
DR   InterPro; IPR004036; Endonuclease-III-like_CS2.
DR   InterPro; IPR003651; Endonuclease3_FeS-loop_motif.
DR   InterPro; IPR004035; Endouclease-III_FeS-bd_BS.
DR   InterPro; IPR003265; HhH-GPD_domain.
DR   InterPro; IPR000445; HhH_motif.
DR   InterPro; IPR023170; HTH_base_excis_C.
DR   Pfam; PF10576; EndIII_4Fe-2S; 1.
DR   Pfam; PF00633; HHH; 1.
DR   Pfam; PF00730; HhH-GPD; 1.
DR   SMART; SM00478; ENDO3c; 1.
DR   SMART; SM00525; FES; 1.
DR   SUPFAM; SSF48150; SSF48150; 1.
DR   PROSITE; PS00764; ENDONUCLEASE_III_1; 1.
DR   PROSITE; PS01155; ENDONUCLEASE_III_2; 1.
PE   4: Predicted;
DR   PRODOM; D5USU6.
DR   SWISS-2DPAGE; D5USU6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001213};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001213}.
FT   DOMAIN       47    200       ENDO3c. {ECO:0000259|SMART:SM00478}.
SQ   SEQUENCE   303 AA;  32922 MW;  75539C4BE6DD0BE0 CRC64;
     MQRSHDPGPK IDSDFTSVLH WFDRTERDLP WRADGVTPWQ ILMSEVMLQQ TPVVRVEAMW
     REWVRRWPTP ADLAAATGAD AVRAWGKLGY PRRAMRLHAC AQAIVAEHAG VVPETVEELL
     ALPGIGDYTA RAVACFAFGQ DVPVVDINVR RVLARAVAGD SDAAAPSARR DLAAATEVLE
     TVPAQRRPRL SAALMELGAL VCTARSPRCG ECPVHAGCAW LAAGAPEGTV APRKVQKYEG
     TDRQARGRLL DVLRAADGAV PRAALDLAWE RDTAQRDRAL DSLLLDGLIE QTDDGRFALS
     GEA
//

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