(data stored in SCRATCH zone)

SWISSPROT: D6XV39_BACIE

ID   D6XV39_BACIE            Unreviewed;       196 AA.
AC   D6XV39;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 66.
DE   RecName: Full=Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469};
DE            EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};
DE   AltName: Full=RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469};
DE   AltName: Full=Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469};
GN   Name=rnmV {ECO:0000256|HAMAP-Rule:MF_01469};
GN   OrderedLocusNames=Bsel_0046 {ECO:0000313|EMBL:ADH97597.1};
OS   Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae;
OC   unclassified Sporolactobacillaceae.
OX   NCBI_TaxID=439292 {ECO:0000313|EMBL:ADH97597.1, ECO:0000313|Proteomes:UP000000271};
RN   [1] {ECO:0000313|EMBL:ADH97597.1, ECO:0000313|Proteomes:UP000000271}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700615 / DSM 15326 / MLS10
RC   {ECO:0000313|Proteomes:UP000000271};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T.,
RA   Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Ovchinnikova G., Stolz J.;
RT   "Complete sequence of Bacillus selenitireducens MLS10.";
RL   Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Required for correct processing of both the 5' and 3'
CC       ends of 5S rRNA precursor. Cleaves both sides of a double-stranded
CC       region yielding mature 5S rRNA in one step. {ECO:0000256|HAMAP-
CC       Rule:MF_01469}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Endonucleolytic cleavage of RNA, removing 21 and 42
CC         nucleotides, respectively, from the 5'- and 3'-termini of a 5S-
CC         rRNA precursor.; EC=3.1.26.8; Evidence={ECO:0000256|HAMAP-
CC         Rule:MF_01469};
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01469}.
CC   -!- SIMILARITY: Belongs to the ribonuclease M5 family.
CC       {ECO:0000256|HAMAP-Rule:MF_01469}.
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DR   EMBL; CP001791; ADH97597.1; -; Genomic_DNA.
DR   RefSeq; WP_013171027.1; NC_014219.1.
DR   STRING; 439292.Bsel_0046; -.
DR   EnsemblBacteria; ADH97597; ADH97597; Bsel_0046.
DR   KEGG; bse:Bsel_0046; -.
DR   eggNOG; ENOG4105HVR; Bacteria.
DR   eggNOG; COG1658; LUCA.
DR   HOGENOM; HOG000203762; -.
DR   KO; K05985; -.
DR   OMA; RLQMFQI; -.
DR   OrthoDB; 1630928at2; -.
DR   BioCyc; BSEL439292:G1GLR-53-MONOMER; -.
DR   Proteomes; UP000000271; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0016853; F:isomerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0043822; F:ribonuclease M5 activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-UniRule.
DR   CDD; cd01027; TOPRIM_RNase_M5_like; 1.
DR   HAMAP; MF_01469; RNase_M5; 1.
DR   InterPro; IPR004466; RNase_M5.
DR   InterPro; IPR025156; RNase_M5_C.
DR   InterPro; IPR006171; TOPRIM_domain.
DR   InterPro; IPR034141; TOPRIM_RNase_M5-like.
DR   Pfam; PF13331; DUF4093; 1.
DR   TIGRFAMs; TIGR00334; 5S_RNA_mat_M5; 1.
DR   PROSITE; PS50880; TOPRIM; 1.
PE   3: Inferred from homology;
DR   PRODOM; D6XV39.
DR   SWISS-2DPAGE; D6XV39.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000271};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01469};
KW   Endonuclease {ECO:0000256|HAMAP-Rule:MF_01469};
KW   Hydrolase {ECO:0000256|HAMAP-Rule:MF_01469};
KW   Isomerase {ECO:0000313|EMBL:ADH97597.1};
KW   Nuclease {ECO:0000256|HAMAP-Rule:MF_01469};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000271};
KW   Ribosome biogenesis {ECO:0000256|HAMAP-Rule:MF_01469};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01469};
KW   rRNA processing {ECO:0000256|HAMAP-Rule:MF_01469};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01469}.
FT   DOMAIN        7     97       Toprim. {ECO:0000259|PROSITE:PS50880}.
SQ   SEQUENCE   196 AA;  22064 MW;  C167A74DE1E00B1C CRC64;
     MERERIGPMI VVEGKNDSLT LKRWFDCDTI ETNGSAVPDA VLERIALALG RRGVIVFTDP
     DYPGDQIRKI IDREVPGCSH AFLPKADAID VRKGKVGIEH AGYRALQEAL ASVRRPGDDA
     QEDPSFETVP LRRLTEAGLL DGPDARSRRR ILGELLGIGY NNSKQLPKRL HQFRISLREF
     EEAQAAMIKE MEQFER
//

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