(data stored in SCRATCH zone)

SWISSPROT: D6XVN3_BACIE

ID   D6XVN3_BACIE            Unreviewed;      1201 AA.
AC   D6XVN3;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 66.
DE   RecName: Full=DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};
DE            Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};
DE            EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};
DE   AltName: Full=RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};
DE   AltName: Full=Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};
GN   Name=rpoC {ECO:0000256|HAMAP-Rule:MF_01322};
GN   OrderedLocusNames=Bsel_0107 {ECO:0000313|EMBL:ADH97656.1};
OS   Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae;
OC   unclassified Sporolactobacillaceae.
OX   NCBI_TaxID=439292 {ECO:0000313|EMBL:ADH97656.1, ECO:0000313|Proteomes:UP000000271};
RN   [1] {ECO:0000313|EMBL:ADH97656.1, ECO:0000313|Proteomes:UP000000271}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700615 / DSM 15326 / MLS10
RC   {ECO:0000313|Proteomes:UP000000271};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T.,
RA   Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Ovchinnikova G., Stolz J.;
RT   "Complete sequence of Bacillus selenitireducens MLS10.";
RL   Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription
CC       of DNA into RNA using the four ribonucleoside triphosphates as
CC       substrates. {ECO:0000256|HAMAP-Rule:MF_01322,
CC       ECO:0000256|RuleBase:RU004279, ECO:0000256|SAAS:SAAS00054030}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:11128, Rhea:RHEA-
CC         COMP:11129, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557,
CC         ChEBI:CHEBI:83400; EC=2.7.7.6; Evidence={ECO:0000256|HAMAP-
CC         Rule:MF_01322, ECO:0000256|RuleBase:RU004279,
CC         ECO:0000256|SAAS:SAAS01121830};
CC   -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1
CC       beta' and 1 omega subunit. When a sigma factor is associated with
CC       the core the holoenzyme is formed, which can initiate
CC       transcription. {ECO:0000256|HAMAP-Rule:MF_01322}.
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC       {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleBase:RU004279}.
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DR   EMBL; CP001791; ADH97656.1; -; Genomic_DNA.
DR   RefSeq; WP_013171086.1; NC_014219.1.
DR   STRING; 439292.Bsel_0107; -.
DR   EnsemblBacteria; ADH97656; ADH97656; Bsel_0107.
DR   KEGG; bse:Bsel_0107; -.
DR   eggNOG; ENOG4105D27; Bacteria.
DR   eggNOG; COG0086; LUCA.
DR   HOGENOM; HOG000218387; -.
DR   KO; K03046; -.
DR   OMA; QGVEIND; -.
DR   OrthoDB; 4421at2; -.
DR   BioCyc; BSEL439292:G1GLR-131-MONOMER; -.
DR   Proteomes; UP000000271; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 1.10.274.100; -; 1.
DR   HAMAP; MF_01322; RNApol_bact_RpoC; 1.
DR   InterPro; IPR012754; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 2.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 2.
DR   SMART; SM00663; RPOLA_N; 1.
DR   TIGRFAMs; TIGR02386; rpoC_TIGR; 1.
PE   3: Inferred from homology;
DR   PRODOM; D6XVN3.
DR   SWISS-2DPAGE; D6XVN3.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000271};
KW   DNA-directed RNA polymerase {ECO:0000256|HAMAP-Rule:MF_01322,
KW   ECO:0000256|RuleBase:RU004279, ECO:0000256|SAAS:SAAS00442970,
KW   ECO:0000313|EMBL:ADH97656.1};
KW   Nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01322,
KW   ECO:0000256|RuleBase:RU004279, ECO:0000256|SAAS:SAAS00442967};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000271};
KW   Transcription {ECO:0000256|HAMAP-Rule:MF_01322,
KW   ECO:0000256|RuleBase:RU004279, ECO:0000256|SAAS:SAAS00442998};
KW   Transferase {ECO:0000256|HAMAP-Rule:MF_01322,
KW   ECO:0000256|RuleBase:RU004279, ECO:0000256|SAAS:SAAS00443006}.
FT   DOMAIN      224    503       RPOLA_N. {ECO:0000259|SMART:SM00663}.
FT   COILED      666    686       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   1201 AA;  134426 MW;  6B9BD35A3B9C1797 CRC64;
     MIDVNNFEYM KIGLASSDKI RSWSRGEVKK PETINYRTLK PEKDGLFCER IFGPTKDWEC
     HCGKYKRVRY KGVVCDRCGV EVTRAKVRRE RMGHIELAAP VSHIWYFKGI PSRMGLVLDM
     SPRSLEEVIY FASYVVTDPG ETPLETKQLL SEKEYRAYYD KYGRSFKATM GAEAIRKLLE
     DIDLDKEADM LKEELETAQG QRRTRAIKRL EVLEAFRHSD NDPSWMVLDV LPVIPPELRP
     MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLDLGAPSII VQNEKRMLQE AVDALIDNGR
     RGRPVTGPGN RPLKSLSHML KGKQGRFRQN LLGKRVDYSG RSVIVVGPNL KMYQCGLPKE
     MALELFKPFV MKELVGQGLA HNIKSAKRKV ERVQPEVWDV LEDIIKEHPV LLNRAPTLHR
     LGIQAFEPIL VEGRAIKLHP LVCTAYNADF DGDQMAVHVP LSAEAQAESR LLMLAAQNIL
     NPKDGKPVVT PSQDMVLGNY YLTLERENAV GEGSIFTGPN EVLSAYQAGY VHLHTRIAMP
     VTSINKTNFE DAVQDHYLLT SVGKVIFNEI LPDSFPYINE PSAVNLEEVT PRKYFVPRGT
     DIKAEFKERE LISPFKKGFL GDIIAEVFKK FKISETSVML DKMKELGFYY STKAGITIGV
     SDIVVLKDKQ DILDEADEKV TRVTKQFRRG LITEEERYDK VIEIWSNAKD VIQEKLLGTL
     VKTNPIFMMS DSGARGNASN FTQLAGMRGL MANPSGRIIE LPIKSSFREG LTVLEYFIST
     HGARKGLADT ALKTADSGYL TRRLVDVAQD VIIRTDDCGT DRGLEVKAIK EGTEVIESLY
     DRLVGRVSFQ RIYHPETGEL LADRNQDITE DMAKVIEDAG VQNVMIRSVF TCDTKHGACK
     KCYGRNLATG AEVEVGEAVG IIAAQSIGEP GTQLTMRTFH TGGVAGDDIT QGLPRIQEVF
     EARNPKGQAV ISEIEGTVAE IKDQNDKKEI VIQGPVETRN YPTMYGARMK VKEGDTILAG
     QELTEGSIDP KELLQVSGVQ GVQEYLLREV QKVYRMQGVE IGDKHVEVMV RQMMRKVRVI
     DSGDTDILPG SLVEIHQYSD ANREVLLKGG RPATGRPVLL GITKASLETD SFLSAASFQE
     TTRVLTDAAI KGKRDQLVGL KENVIIGKLV PAGTGMQRYR QLKAVNTEDN SDIIEQPAGT
     E
//

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