(data stored in SCRATCH zone)

SWISSPROT: D6XVR6_BACIE

ID   D6XVR6_BACIE            Unreviewed;       121 AA.
AC   D6XVR6;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 61.
DE   RecName: Full=30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315};
GN   Name=rpsM {ECO:0000256|HAMAP-Rule:MF_01315};
GN   OrderedLocusNames=Bsel_0140 {ECO:0000313|EMBL:ADH97689.1};
OS   Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae;
OC   unclassified Sporolactobacillaceae.
OX   NCBI_TaxID=439292 {ECO:0000313|EMBL:ADH97689.1, ECO:0000313|Proteomes:UP000000271};
RN   [1] {ECO:0000313|EMBL:ADH97689.1, ECO:0000313|Proteomes:UP000000271}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700615 / DSM 15326 / MLS10
RC   {ECO:0000313|Proteomes:UP000000271};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T.,
RA   Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Ovchinnikova G., Stolz J.;
RT   "Complete sequence of Bacillus selenitireducens MLS10.";
RL   Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Located at the top of the head of the 30S subunit, it
CC       contacts several helices of the 16S rRNA. In the 70S ribosome it
CC       contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S
CC       subunit (bridge B1b), connecting the 2 subunits; these bridges are
CC       implicated in subunit movement. Contacts the tRNAs in the A and P-
CC       sites. {ECO:0000256|HAMAP-Rule:MF_01315}.
CC   -!- SUBUNIT: Part of the 30S ribosomal subunit. Forms a loose
CC       heterodimer with protein S19. Forms two bridges to the 50S subunit
CC       in the 70S ribosome. {ECO:0000256|HAMAP-Rule:MF_01315}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uS13
CC       family. {ECO:0000256|HAMAP-Rule:MF_01315,
CC       ECO:0000256|RuleBase:RU003830}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001791; ADH97689.1; -; Genomic_DNA.
DR   RefSeq; WP_013171118.1; NC_014219.1.
DR   STRING; 439292.Bsel_0140; -.
DR   EnsemblBacteria; ADH97689; ADH97689; Bsel_0140.
DR   KEGG; bse:Bsel_0140; -.
DR   eggNOG; ENOG4108Z04; Bacteria.
DR   eggNOG; COG0099; LUCA.
DR   HOGENOM; HOG000039879; -.
DR   KO; K02952; -.
DR   OMA; QTNARTR; -.
DR   OrthoDB; 1772647at2; -.
DR   BioCyc; BSEL439292:G1GLR-165-MONOMER; -.
DR   Proteomes; UP000000271; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 4.10.910.10; -; 1.
DR   HAMAP; MF_01315; Ribosomal_S13_S18; 1.
DR   InterPro; IPR027437; 30s_Rbsml_prot_S13_C.
DR   InterPro; IPR001892; Ribosomal_S13.
DR   InterPro; IPR010979; Ribosomal_S13-like_H2TH.
DR   InterPro; IPR019980; Ribosomal_S13_bac-type.
DR   InterPro; IPR018269; Ribosomal_S13_CS.
DR   PANTHER; PTHR10871:SF1; PTHR10871:SF1; 1.
DR   Pfam; PF00416; Ribosomal_S13; 1.
DR   PIRSF; PIRSF002134; Ribosomal_S13; 1.
DR   SUPFAM; SSF46946; SSF46946; 1.
DR   TIGRFAMs; TIGR03631; uS13_bact; 1.
DR   PROSITE; PS00646; RIBOSOMAL_S13_1; 1.
DR   PROSITE; PS50159; RIBOSOMAL_S13_2; 1.
PE   3: Inferred from homology;
DR   PRODOM; D6XVR6.
DR   SWISS-2DPAGE; D6XVR6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000271};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000271};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01315,
KW   ECO:0000256|RuleBase:RU003830};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01315,
KW   ECO:0000256|RuleBase:RU003830, ECO:0000313|EMBL:ADH97689.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01315};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01315};
KW   tRNA-binding {ECO:0000256|HAMAP-Rule:MF_01315}.
SQ   SEQUENCE   121 AA;  13616 MW;  3C5458E8EE42BEB1 CRC64;
     MARVAGVDIP RDKRVVVSLT YVFGIGRSKA AQILTEAGVS ENTRVRDLTE DELAKIREVV
     DGVKVEGDLR REVSLNIKRL IEIGSYRGIR HRRGLPVRGQ KTKNNARTRK GPRRTVANKK
     K
//

If you have problems or comments...

PBIL Back to PBIL home page