(data stored in SCRATCH zone)

SWISSPROT: D6XVY8_BACIE

ID   D6XVY8_BACIE            Unreviewed;       185 AA.
AC   D6XVY8;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 61.
DE   SubName: Full=RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADH97761.1};
GN   OrderedLocusNames=Bsel_0215 {ECO:0000313|EMBL:ADH97761.1};
OS   Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae;
OC   unclassified Sporolactobacillaceae.
OX   NCBI_TaxID=439292 {ECO:0000313|EMBL:ADH97761.1, ECO:0000313|Proteomes:UP000000271};
RN   [1] {ECO:0000313|EMBL:ADH97761.1, ECO:0000313|Proteomes:UP000000271}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700615 / DSM 15326 / MLS10
RC   {ECO:0000313|Proteomes:UP000000271};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T.,
RA   Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Ovchinnikova G., Stolz J.;
RT   "Complete sequence of Bacillus selenitireducens MLS10.";
RL   Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS01160068}.
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DR   EMBL; CP001791; ADH97761.1; -; Genomic_DNA.
DR   RefSeq; WP_013171190.1; NC_014219.1.
DR   STRING; 439292.Bsel_0215; -.
DR   EnsemblBacteria; ADH97761; ADH97761; Bsel_0215.
DR   KEGG; bse:Bsel_0215; -.
DR   eggNOG; ENOG4106T94; Bacteria.
DR   eggNOG; ENOG41102MD; LUCA.
DR   HOGENOM; HOG000015523; -.
DR   KO; K03088; -.
DR   OMA; YRSTYYK; -.
DR   OrthoDB; 1914729at2; -.
DR   BioCyc; BSEL439292:G1GLR-239-MONOMER; -.
DR   Proteomes; UP000000271; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR43133; PTHR43133; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; D6XVY8.
DR   SWISS-2DPAGE; D6XVY8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000271};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000271};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       24     88       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      122    173       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   185 AA;  21429 MW;  5E5A4BD6F40094BC CRC64;
     MTDEELIQEI LDGNDEAMKE LHGRHVQSVF QYLYIQMSDY HDAQELLQDV MYKAARRLAT
     FKGDSAFKTW LFAIAKHAVI DYYRTRGKRR RTTAVDNTVM DAVGDLKESA EQTVIRQMET
     ESVMQTIRQL PQTYRDVLHL RFIEGFSIKE TAKVMGKTSM SVKALQKRAR AELVNRIGNE
     VTAYE
//

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