(data stored in SCRATCH zone)

SWISSPROT: D6XY02_BACIE

ID   D6XY02_BACIE            Unreviewed;       268 AA.
AC   D6XY02;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 66.
DE   RecName: Full=RNA polymerase sigma factor {ECO:0000256|RuleBase:RU362124};
GN   OrderedLocusNames=Bsel_0539 {ECO:0000313|EMBL:ADH98075.1};
OS   Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae;
OC   unclassified Sporolactobacillaceae.
OX   NCBI_TaxID=439292 {ECO:0000313|EMBL:ADH98075.1, ECO:0000313|Proteomes:UP000000271};
RN   [1] {ECO:0000313|EMBL:ADH98075.1, ECO:0000313|Proteomes:UP000000271}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700615 / DSM 15326 / MLS10
RC   {ECO:0000313|Proteomes:UP000000271};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T.,
RA   Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Ovchinnikova G., Stolz J.;
RT   "Complete sequence of Bacillus selenitireducens MLS10.";
RL   Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Sigma factors are initiation factors that promote the
CC       attachment of RNA polymerase to specific initiation sites and are
CC       then released. {ECO:0000256|RuleBase:RU362124}.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC       {ECO:0000256|RuleBase:RU362124, ECO:0000256|SAAS:SAAS00611284}.
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DR   EMBL; CP001791; ADH98075.1; -; Genomic_DNA.
DR   STRING; 439292.Bsel_0539; -.
DR   EnsemblBacteria; ADH98075; ADH98075; Bsel_0539.
DR   KEGG; bse:Bsel_0539; -.
DR   eggNOG; ENOG4105E65; Bacteria.
DR   eggNOG; COG1191; LUCA.
DR   HOGENOM; HOG000270270; -.
DR   KO; K03090; -.
DR   OMA; IRDKTWS; -.
DR   Proteomes; UP000000271; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 2.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014288; RNA_pol_sigma-B.
DR   InterPro; IPR014322; RNA_pol_sigma-B/F/G.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88659; SSF88659; 2.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02980; SigBFG; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
DR   TIGRFAMs; TIGR02941; Sigma_B; 1.
DR   PROSITE; PS00715; SIGMA70_1; 1.
DR   PROSITE; PS00716; SIGMA70_2; 1.
PE   3: Inferred from homology;
DR   PRODOM; D6XY02.
DR   SWISS-2DPAGE; D6XY02.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000271};
KW   DNA-binding {ECO:0000256|RuleBase:RU362124,
KW   ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000271};
KW   Sigma factor {ECO:0000256|RuleBase:RU362124,
KW   ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|RuleBase:RU362124,
KW   ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|RuleBase:RU362124,
KW   ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       65     78       RNA_pol_sigma70. {ECO:0000259|PROSITE:
FT                                PS00715}.
FT   DOMAIN      230    256       RNA_pol_sigma70. {ECO:0000259|PROSITE:
FT                                PS00716}.
SQ   SEQUENCE   268 AA;  30867 MW;  E7CC7A5DD5A32AA3 CRC64;
     MTREPRKNSR SSKQKEEDKE RQLKMIAEFQ ETGDDEIQTQ LVLEYENLVH ALARKFSRGQ
     RHDEDLVQVG MIGLLAALRR FDPSFGRSFE SFAVPTIVGE IKRFIRDKTW SVHVPRRIKE
     LGPKIKSAVE NLTTELQRSP QVEEIADYLE VSEEEILETM EMGKSYQALS VDRSIEADDE
     GSAVTLLDLV GSVESGYEQT DQQLLLEKAF QVLTDREKQI LQLTYFENMS QKETGEQLGI
     SQMHVSRLQR RALQKLKDSI RIEATEAF
//

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