(data stored in SCRATCH zone)

SWISSPROT: D6ZA96_SEGRD

ID   D6ZA96_SEGRD            Unreviewed;       221 AA.
AC   D6ZA96;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   16-JAN-2019, entry version 45.
DE   RecName: Full=50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906};
GN   Name=rplC {ECO:0000256|HAMAP-Rule:MF_01325};
GN   OrderedLocusNames=Srot_0149 {ECO:0000313|EMBL:ADG96638.1};
OS   Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 /
OS   DSM 44985 / JCM 13578).
OC   Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae;
OC   Segniliparus.
OX   NCBI_TaxID=640132 {ECO:0000313|EMBL:ADG96638.1, ECO:0000313|Proteomes:UP000002247};
RN   [1] {ECO:0000313|EMBL:ADG96638.1, ECO:0000313|Proteomes:UP000002247}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578
RC   {ECO:0000313|Proteomes:UP000002247};
RX   PubMed=21304703; DOI=10.4056/sigs.791633;
RA   Sikorski J., Lapidus A., Copeland A., Misra M., Glavina Del Rio T.,
RA   Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Jando M.,
RA   Schneider S., Bruce D., Goodwin L., Pitluck S., Liolios K.,
RA   Mikhailova N., Pati A., Ivanova N., Mavromatis K., Chen A.,
RA   Palaniappan K., Chertkov O., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Detter J.C., Han C., Rohde M., Goker M.,
RA   Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA   Klenk H.P.;
RT   "Complete genome sequence of Segniliparus rotundus type strain (CDC
RT   1076).";
RL   Stand. Genomic Sci. 2:203-211(2010).
CC   -!- FUNCTION: One of the primary rRNA binding proteins, it binds
CC       directly near the 3'-end of the 23S rRNA, where it nucleates
CC       assembly of the 50S subunit. {ECO:0000256|HAMAP-Rule:MF_01325,
CC       ECO:0000256|RuleBase:RU003906}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. Forms a cluster with
CC       proteins L14 and L19. {ECO:0000256|HAMAP-Rule:MF_01325,
CC       ECO:0000256|RuleBase:RU003906}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL3 family.
CC       {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003905}.
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DR   EMBL; CP001958; ADG96638.1; -; Genomic_DNA.
DR   RefSeq; WP_013137094.1; NC_014168.1.
DR   STRING; 640132.Srot_0149; -.
DR   EnsemblBacteria; ADG96638; ADG96638; Srot_0149.
DR   KEGG; srt:Srot_0149; -.
DR   eggNOG; ENOG4105EEE; Bacteria.
DR   eggNOG; COG0087; LUCA.
DR   HOGENOM; HOG000100368; -.
DR   KO; K02906; -.
DR   OMA; KGMRMAG; -.
DR   OrthoDB; 1270636at2; -.
DR   BioCyc; SROT640132:G1GLH-153-MONOMER; -.
DR   Proteomes; UP000002247; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   HAMAP; MF_01325_B; Ribosomal_L3_B; 1.
DR   InterPro; IPR000597; Ribosomal_L3.
DR   InterPro; IPR019927; Ribosomal_L3_bac/org-type.
DR   InterPro; IPR019926; Ribosomal_L3_CS.
DR   InterPro; IPR009000; Transl_B-barrel_sf.
DR   PANTHER; PTHR11229; PTHR11229; 1.
DR   Pfam; PF00297; Ribosomal_L3; 1.
DR   SUPFAM; SSF50447; SSF50447; 1.
DR   TIGRFAMs; TIGR03625; L3_bact; 1.
DR   PROSITE; PS00474; RIBOSOMAL_L3; 1.
PE   3: Inferred from homology;
DR   PRODOM; D6ZA96.
DR   SWISS-2DPAGE; D6ZA96.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002247};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002247};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01325,
KW   ECO:0000256|RuleBase:RU003905};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01325,
KW   ECO:0000256|RuleBase:RU003905, ECO:0000313|EMBL:ADG96638.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01325,
KW   ECO:0000256|RuleBase:RU003906};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01325,
KW   ECO:0000256|RuleBase:RU003906}.
SQ   SEQUENCE   221 AA;  23580 MW;  9CD58847272EE536 CRC64;
     MTSSTSKNRV GLLGAKLGMT QVFDERNRVV PVTVIRTGVN VVTQVRTPER DKYSAIQLAF
     GHIDPRKVNK PLAGQFEKAG VTPRRHLAEF RLDDVSGYEV GQQIDATVFS AGDLVDVTGT
     SKGKGFAGTM KRHGFKGQGA SHGAHKVHRR PGSIGACAFP GRVFKGTRMA GRMGNAKTTT
     QNLTVFRVDP EAGVLLIKGA VPGRDGGLVF IRSAVKKGVA K
//

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