(data stored in SCRATCH zone)

SWISSPROT: D6ZAA3_SEGRD

ID   D6ZAA3_SEGRD            Unreviewed;       138 AA.
AC   D6ZAA3;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   16-JAN-2019, entry version 44.
DE   RecName: Full=50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414};
GN   Name=rplP {ECO:0000256|HAMAP-Rule:MF_01342};
GN   OrderedLocusNames=Srot_0156 {ECO:0000313|EMBL:ADG96645.1};
OS   Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 /
OS   DSM 44985 / JCM 13578).
OC   Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae;
OC   Segniliparus.
OX   NCBI_TaxID=640132 {ECO:0000313|EMBL:ADG96645.1, ECO:0000313|Proteomes:UP000002247};
RN   [1] {ECO:0000313|EMBL:ADG96645.1, ECO:0000313|Proteomes:UP000002247}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578
RC   {ECO:0000313|Proteomes:UP000002247};
RX   PubMed=21304703; DOI=10.4056/sigs.791633;
RA   Sikorski J., Lapidus A., Copeland A., Misra M., Glavina Del Rio T.,
RA   Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Jando M.,
RA   Schneider S., Bruce D., Goodwin L., Pitluck S., Liolios K.,
RA   Mikhailova N., Pati A., Ivanova N., Mavromatis K., Chen A.,
RA   Palaniappan K., Chertkov O., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Detter J.C., Han C., Rohde M., Goker M.,
RA   Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA   Klenk H.P.;
RT   "Complete genome sequence of Segniliparus rotundus type strain (CDC
RT   1076).";
RL   Stand. Genomic Sci. 2:203-211(2010).
CC   -!- FUNCTION: Binds 23S rRNA and is also seen to make contacts with
CC       the A and possibly P site tRNAs. {ECO:0000256|HAMAP-Rule:MF_01342,
CC       ECO:0000256|RuleBase:RU004414}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-
CC       Rule:MF_01342, ECO:0000256|RuleBase:RU004414}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL16
CC       family. {ECO:0000256|HAMAP-Rule:MF_01342,
CC       ECO:0000256|RuleBase:RU004413}.
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DR   EMBL; CP001958; ADG96645.1; -; Genomic_DNA.
DR   RefSeq; WP_013137101.1; NC_014168.1.
DR   STRING; 640132.Srot_0156; -.
DR   EnsemblBacteria; ADG96645; ADG96645; Srot_0156.
DR   KEGG; srt:Srot_0156; -.
DR   eggNOG; ENOG4108R70; Bacteria.
DR   eggNOG; COG0197; LUCA.
DR   HOGENOM; HOG000164573; -.
DR   KO; K02878; -.
DR   OMA; KGAVEYW; -.
DR   OrthoDB; 1786618at2; -.
DR   BioCyc; SROT640132:G1GLH-160-MONOMER; -.
DR   Proteomes; UP000002247; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd01433; Ribosomal_L16_L10e; 1.
DR   Gene3D; 3.90.1170.10; -; 1.
DR   HAMAP; MF_01342; Ribosomal_L16; 1.
DR   InterPro; IPR016180; Ribosomal_L10e/L16.
DR   InterPro; IPR036920; Ribosomal_L10e/L16_sf.
DR   InterPro; IPR000114; Ribosomal_L16.
DR   InterPro; IPR020798; Ribosomal_L16_CS.
DR   PANTHER; PTHR12220; PTHR12220; 1.
DR   Pfam; PF00252; Ribosomal_L16; 1.
DR   PRINTS; PR00060; RIBOSOMALL16.
DR   SUPFAM; SSF54686; SSF54686; 1.
DR   TIGRFAMs; TIGR01164; rplP_bact; 1.
DR   PROSITE; PS00586; RIBOSOMAL_L16_1; 1.
DR   PROSITE; PS00701; RIBOSOMAL_L16_2; 1.
PE   3: Inferred from homology;
DR   PRODOM; D6ZAA3.
DR   SWISS-2DPAGE; D6ZAA3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002247};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002247};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01342,
KW   ECO:0000256|RuleBase:RU004413};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01342,
KW   ECO:0000256|RuleBase:RU004413, ECO:0000313|EMBL:ADG96645.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01342,
KW   ECO:0000256|RuleBase:RU004414};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01342,
KW   ECO:0000256|RuleBase:RU004414};
KW   tRNA-binding {ECO:0000256|HAMAP-Rule:MF_01342,
KW   ECO:0000256|RuleBase:RU004414}.
FT   DOMAIN        4    132       Ribosomal_L16. {ECO:0000259|Pfam:
FT                                PF00252}.
SQ   SEQUENCE   138 AA;  15831 MW;  06D22E808C642C1D CRC64;
     MLIPRKVKHR KQHHPSRSGA AKGGTKVTFG EFGIQALEPA YVTNRQIESA RIAINRHIRR
     GGKVWINIYP DRPLTKKPAE TRMGSGKGSP EWWIANVKPG RVLFEMSFPN EETAREALRR
     AQHKLPLKTR IVTREEQF
//

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