(data stored in SCRATCH zone)

SWISSPROT: D6ZAC1_SEGRD

ID   D6ZAC1_SEGRD            Unreviewed;       212 AA.
AC   D6ZAC1;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 49.
DE   SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADG96663.1};
GN   OrderedLocusNames=Srot_0174 {ECO:0000313|EMBL:ADG96663.1};
OS   Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 /
OS   DSM 44985 / JCM 13578).
OC   Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae;
OC   Segniliparus.
OX   NCBI_TaxID=640132 {ECO:0000313|EMBL:ADG96663.1, ECO:0000313|Proteomes:UP000002247};
RN   [1] {ECO:0000313|EMBL:ADG96663.1, ECO:0000313|Proteomes:UP000002247}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578
RC   {ECO:0000313|Proteomes:UP000002247};
RX   PubMed=21304703; DOI=10.4056/sigs.791633;
RA   Sikorski J., Lapidus A., Copeland A., Misra M., Glavina Del Rio T.,
RA   Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Jando M.,
RA   Schneider S., Bruce D., Goodwin L., Pitluck S., Liolios K.,
RA   Mikhailova N., Pati A., Ivanova N., Mavromatis K., Chen A.,
RA   Palaniappan K., Chertkov O., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Detter J.C., Han C., Rohde M., Goker M.,
RA   Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA   Klenk H.P.;
RT   "Complete genome sequence of Segniliparus rotundus type strain (CDC
RT   1076).";
RL   Stand. Genomic Sci. 2:203-211(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001958; ADG96663.1; -; Genomic_DNA.
DR   EnsemblBacteria; ADG96663; ADG96663; Srot_0174.
DR   KEGG; srt:Srot_0174; -.
DR   eggNOG; ENOG41065WD; Bacteria.
DR   eggNOG; ENOG41127AZ; LUCA.
DR   HOGENOM; HOG000076662; -.
DR   OMA; RPYAPRM; -.
DR   Proteomes; UP000002247; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001647; HTH_TetR.
DR   Pfam; PF00440; TetR_N; 1.
DR   PRINTS; PR00455; HTHTETR.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS50977; HTH_TETR_2; 1.
PE   4: Predicted;
DR   PRODOM; D6ZAC1.
DR   SWISS-2DPAGE; D6ZAC1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002247};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335,
KW   ECO:0000256|SAAS:SAAS00132209};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002247};
KW   Transcription {ECO:0000256|SAAS:SAAS00131596};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00132066}.
FT   DOMAIN       17     77       HTH tetR-type. {ECO:0000259|PROSITE:
FT                                PS50977}.
FT   DNA_BIND     40     59       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00335}.
SQ   SEQUENCE   212 AA;  23343 MW;  8BB5FBFCFD5E655C CRC64;
     MSNTVSRRPY APRMPAEQRR EQILDAALAL ICSGGIEAVT VDAVAKSIGV TRPVVYSQFT
     DSNNILRESL KREGNLAIAQ LAAIVPKNLN DAEPTTVLTD MTRSFLETVL SSPNRWRSIL
     LPAYGGSPPA WQKFKKRAEA TAFEVLTGFL KTLAGARQKD MDLELAAHAL LRAWEEAGRL
     VLADPEVYTV ERLTTFYSAL FSSLVTTPKH KP
//

If you have problems or comments...

PBIL Back to PBIL home page