(data stored in SCRATCH zone)

SWISSPROT: D6ZZV7_STAND

ID   D6ZZV7_STAND            Unreviewed;       196 AA.
AC   D6ZZV7;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   16-JAN-2019, entry version 43.
DE   RecName: Full=Lysozyme {ECO:0000256|RuleBase:RU003788};
DE            EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};
GN   OrderedLocusNames=Snov_0034 {ECO:0000313|EMBL:ADH87371.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87371.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87371.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Hydrolysis of (1->4)-beta-linkages between N-
CC         acetylmuramic acid and N-acetyl-D-glucosamine residues in a
CC         peptidoglycan and between N-acetyl-D-glucosamine residues in
CC         chitodextrins.; EC=3.2.1.17;
CC         Evidence={ECO:0000256|RuleBase:RU003788};
CC   -!- SIMILARITY: Belongs to the glycosyl hydrolase 24 family.
CC       {ECO:0000256|RuleBase:RU003788}.
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DR   EMBL; CP002026; ADH87371.1; -; Genomic_DNA.
DR   RefSeq; WP_013164876.1; NC_014217.1.
DR   STRING; 639283.Snov_0034; -.
DR   CAZy; GH24; Glycoside Hydrolase Family 24.
DR   EnsemblBacteria; ADH87371; ADH87371; Snov_0034.
DR   KEGG; sno:Snov_0034; -.
DR   eggNOG; ENOG41066YB; Bacteria.
DR   eggNOG; COG3772; LUCA.
DR   HOGENOM; HOG000277068; -.
DR   OMA; ACKELQR; -.
DR   OrthoDB; 1703032at2; -.
DR   BioCyc; SNOV639283:G1GLM-34-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003796; F:lysozyme activity; IEA:UniProtKB-EC.
DR   GO; GO:0016998; P:cell wall macromolecule catabolic process; IEA:InterPro.
DR   GO; GO:0019835; P:cytolysis; IEA:UniProtKB-KW.
DR   GO; GO:0042742; P:defense response to bacterium; IEA:UniProtKB-KW.
DR   GO; GO:0009253; P:peptidoglycan catabolic process; IEA:InterPro.
DR   InterPro; IPR002196; Glyco_hydro_24.
DR   InterPro; IPR023346; Lysozyme-like_dom_sf.
DR   Pfam; PF00959; Phage_lysozyme; 1.
DR   SUPFAM; SSF53955; SSF53955; 1.
PE   3: Inferred from homology;
DR   PRODOM; D6ZZV7.
DR   SWISS-2DPAGE; D6ZZV7.
KW   Antimicrobial {ECO:0000256|RuleBase:RU003788};
KW   Bacteriolytic enzyme {ECO:0000256|RuleBase:RU003788};
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   Glycosidase {ECO:0000256|RuleBase:RU003788};
KW   Hydrolase {ECO:0000256|RuleBase:RU003788,
KW   ECO:0000313|EMBL:ADH87371.1}; Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     12     32       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   196 AA;  21074 MW;  8CA824405E3C4892 CRC64;
     MPITKLRPTG RARAAIAAVM ALAISIGGIW YVPTSSGKQY PAAVVLAAEH IIKGWEGLRL
     IAYRDIVGVW TICYGETKGV RAGMRKTAAE CEALLYERVY RDFYIPMSAC AAPAFVQAPV
     PVQAAMLGGG YNFGVGGWCG STTARYIRAK LWRQACDAQT AWNRAGGKVV QGLVNRREMG
     DASRIGEGEL CVTGLQ
//

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