(data stored in SCRATCH zone)

SWISSPROT: D6ZZZ1_STAND

ID   D6ZZZ1_STAND            Unreviewed;       568 AA.
AC   D6ZZZ1;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 45.
DE   SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:ADH87405.1};
GN   OrderedLocusNames=Snov_0068 {ECO:0000313|EMBL:ADH87405.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87405.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87405.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
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DR   EMBL; CP002026; ADH87405.1; -; Genomic_DNA.
DR   RefSeq; WP_013164910.1; NC_014217.1.
DR   STRING; 639283.Snov_0068; -.
DR   EnsemblBacteria; ADH87405; ADH87405; Snov_0068.
DR   KEGG; sno:Snov_0068; -.
DR   eggNOG; ENOG4107QIM; Bacteria.
DR   eggNOG; COG1793; LUCA.
DR   HOGENOM; HOG000036007; -.
DR   KO; K10747; -.
DR   OMA; WLFEESY; -.
DR   OrthoDB; 1073940at2; -.
DR   BioCyc; SNOV639283:G1GLM-68-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   InterPro; IPR026333; ATP_dep_DNA_lig_pp_1105_fam.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR016059; DNA_ligase_ATP-dep_CS.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR04120; DNA_lig_bact; 1.
DR   PROSITE; PS00697; DNA_LIGASE_A1; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
DR   PRODOM; D6ZZZ1.
DR   SWISS-2DPAGE; D6ZZZ1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   Ligase {ECO:0000313|EMBL:ADH87405.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633}.
FT   DOMAIN      316    443       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   568 AA;  63055 MW;  C50247320195CF9C CRC64;
     MNRFAALLDR LAYEPRRNGK IRLIADYFAH TPNPERGWAL AALTGALSFR NAKPGLIRQL
     ISERTDPVLF ALSYDYVGDL SETVALMWPA PHGLNDTEPP ALSAIVHAFT HMGKAELPSV
     LASLLDRLDE TGRWALLKLI TGGLRIGVSA RLAKTAVAAL GERTPDEIEL VWPGLEPPYE
     ALFAWAEGRG ERPETDDPAP FRPVMLSHPL EDTDFESLDP AQFRAEWKWD GIRIQAVRGA
     GADGRHVTRL YSRTGEDISS AFPDLAEALA FDGAVDGELL ILREGRVQSF NVLQQRLNRK
     VVSPKLILEF PAHIRAYDLL FEAGEDLRDL PFEARRARLE ALIAAHPQDG RLDLSPIVPF
     ESWDDLASAR ADPAAHGAGD DAEAVEGVML KRVDSFYVPG RPKGPWWKWK RDPHSVDAVL
     MYAQRGHGKR SSFYSDYTFG VWTGEKSGEG ELVPVGKAYF GFTDAELMEI DRFVRRNTVN
     RFGPVREVVH TPTEGLVLEV AFEGLARSTR HRSGLAMRFP RIARLRWDKP PGEADRLETL
     ERMIGDEGRA PRQPSAVIGK APSSAEGA
//

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