(data stored in SCRATCH zone)

SWISSPROT: D7A0T2_STAND

ID   D7A0T2_STAND            Unreviewed;       283 AA.
AC   D7A0T2;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   16-JAN-2019, entry version 50.
DE   SubName: Full=Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADH87442.1};
GN   OrderedLocusNames=Snov_0105 {ECO:0000313|EMBL:ADH87442.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87442.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87442.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002026; ADH87442.1; -; Genomic_DNA.
DR   RefSeq; WP_013164947.1; NC_014217.1.
DR   STRING; 639283.Snov_0105; -.
DR   EnsemblBacteria; ADH87442; ADH87442; Snov_0105.
DR   KEGG; sno:Snov_0105; -.
DR   eggNOG; ENOG4107MJH; Bacteria.
DR   eggNOG; COG1176; LUCA.
DR   HOGENOM; HOG000263581; -.
DR   KO; K02054; -.
DR   OMA; WTSNVIR; -.
DR   OrthoDB; 1488093at2; -.
DR   BioCyc; SNOV639283:G1GLM-105-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   CDD; cd06261; TM_PBP2; 1.
DR   Gene3D; 1.10.3720.10; -; 1.
DR   InterPro; IPR000515; MetI-like.
DR   InterPro; IPR035906; MetI-like_sf.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; D7A0T2.
DR   SWISS-2DPAGE; D7A0T2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     12     36       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     71     90       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    102    126       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    146    169       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    252    277       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN       65    273       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   283 AA;  31396 MW;  E158FAD7A4DDEAEF CRC64;
     MTLSRIAPYL QAAPLTLILT AFLVLPIATI VMVSFWDYDS IQIFPAFVFT NYEETITSPV
     TWNTYLNTLK YTGIVWAVTL FIGFWVAYYL AFHIRSATTQ MVLFLVCTIP FLTSNIIRMI
     SWIPFLGRNG LLNQTLMTMG VIDQPLEFLL FSDFAVVLAM VHLYTLFMVT PIFNTLMRID
     RALIEAARDA GANALQILTN VIIPLAKPGI AIGSIFVVTL VMGDFITVRF MSGGQSASVG
     LMMANQIALL QYPAAAANAV ILLVLVLLLV GGILRIVNIR REL
//

If you have problems or comments...

PBIL Back to PBIL home page