(data stored in SCRATCH zone)

SWISSPROT: D7A0T6_STAND

ID   D7A0T6_STAND            Unreviewed;       352 AA.
AC   D7A0T6;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   16-JAN-2019, entry version 49.
DE   SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADH87446.1};
GN   OrderedLocusNames=Snov_0109 {ECO:0000313|EMBL:ADH87446.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87446.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87446.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
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DR   EMBL; CP002026; ADH87446.1; -; Genomic_DNA.
DR   STRING; 639283.Snov_0109; -.
DR   EnsemblBacteria; ADH87446; ADH87446; Snov_0109.
DR   KEGG; sno:Snov_0109; -.
DR   eggNOG; ENOG41090S1; Bacteria.
DR   eggNOG; ENOG4111NRR; LUCA.
DR   HOGENOM; HOG000000673; -.
DR   OMA; WRNLHGM; -.
DR   BioCyc; SNOV639283:G1GLM-109-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   InterPro; IPR035418; AraC_binding_2.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR   Pfam; PF14525; AraC_binding_2; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   PRINTS; PR00032; HTHARAC.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; D7A0T6.
DR   SWISS-2DPAGE; D7A0T6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00048696};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633};
KW   Transcription {ECO:0000256|SAAS:SAAS00048810};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00048643}.
FT   DOMAIN      227    327       HTH araC/xylS-type. {ECO:0000259|PROSITE:
FT                                PS01124}.
SQ   SEQUENCE   352 AA;  38512 MW;  43A15480E0DA9C5C CRC64;
     MTETANSELL APIAADPRVQ HIVMDSGTLP QKEAIALWQE SLGVFYDVRL RNKADRFSFR
     ADAYHLGEIL LTGYSCVAQS FDRTRARIGR DGLDHITLQV CLRGSHGRRD GGAADQANAG
     DLIIADLAQA QATATTDHDS LSLTIPRRLL APLLKTPDEH NLRRIPGNAP LAALLRNHLT
     GLYAGAGAMT ADEAEAIVRP TIELAAAALN ASISEESAAS VQLVLTRQIS RHIDQHVLDP
     ALSGESIAAA FGISTRKLYY LFEAHGGVAA YVTRGRLQLA RAMLADPTQQ GRSIADVAEL
     HGFAYRTNFV RAFRREFGVT PREVRAHAAE GRRLFERPGD DTTMWHWVRQ LK
//

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