(data stored in SCRATCH zone)

SWISSPROT: D7A1X4_STAND

ID   D7A1X4_STAND            Unreviewed;       368 AA.
AC   D7A1X4;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   16-JAN-2019, entry version 52.
DE   SubName: Full=Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADH87590.1};
GN   OrderedLocusNames=Snov_0255 {ECO:0000313|EMBL:ADH87590.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87590.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87590.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002026; ADH87590.1; -; Genomic_DNA.
DR   RefSeq; WP_013165095.1; NC_014217.1.
DR   STRING; 639283.Snov_0255; -.
DR   EnsemblBacteria; ADH87590; ADH87590; Snov_0255.
DR   KEGG; sno:Snov_0255; -.
DR   eggNOG; ENOG4108I5X; Bacteria.
DR   eggNOG; COG4174; LUCA.
DR   HOGENOM; HOG000170244; -.
DR   KO; K13894; -.
DR   OMA; TFVVIQF; -.
DR   OrthoDB; 1479518at2; -.
DR   BioCyc; SNOV639283:G1GLM-257-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   CDD; cd06261; TM_PBP2; 1.
DR   Gene3D; 1.10.3720.10; -; 1.
DR   InterPro; IPR000515; MetI-like.
DR   InterPro; IPR035906; MetI-like_sf.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; D7A1X4.
DR   SWISS-2DPAGE; D7A1X4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM      9     30       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    141    162       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    174    206       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    226    249       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    286    311       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    331    350       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN      135    350       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   368 AA;  40626 MW;  3D778C2C6A1E291F CRC64;
     MLAYIVRRLA LMVPTVIGIM LISFAVVQFA PGGPVEKVIA ELTGQGASAT SRITGGGGDF
     GGMQQNAPAG DPVSSKYRGA QGLDPAFIKQ LEKQFGFDKP AYERFGKMLW DYARFDFGRS
     YFRDISVIDL IAEKMPVSIS LGLWMTLITY AISIPLGIAK AVRDGSRFDV WTSAVIIVGY
     AIPSFLFAIL LIILFAGGSF FSWFPLRGLT SDNWDQLSLG AKILDYFWHL ALPITSMVLG
     AFATMALLTK NSFLDEIRKQ YVITARMKGL SERAVLYRHV FRNAMLIIIA GFPGAFVAAF
     FSGSLLIETI FSLDGLGLLG FESVLNRDYP VVFANLYIFS LVGLLINLLS DLTYTWVDPR
     IDFETRDV
//

If you have problems or comments...

PBIL Back to PBIL home page