(data stored in SCRATCH zone)

SWISSPROT: D7A2Y2_STAND

ID   D7A2Y2_STAND            Unreviewed;       290 AA.
AC   D7A2Y2;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 38.
DE   SubName: Full=Transcriptional regulator, TrmB {ECO:0000313|EMBL:ADH87700.1};
GN   OrderedLocusNames=Snov_0367 {ECO:0000313|EMBL:ADH87700.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87700.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87700.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002026; ADH87700.1; -; Genomic_DNA.
DR   STRING; 639283.Snov_0367; -.
DR   EnsemblBacteria; ADH87700; ADH87700; Snov_0367.
DR   KEGG; sno:Snov_0367; -.
DR   eggNOG; ENOG4108NGU; Bacteria.
DR   eggNOG; COG1378; LUCA.
DR   HOGENOM; HOG000251187; -.
DR   OMA; RENIWNI; -.
DR   Proteomes; UP000006633; Chromosome.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR021586; Tscrpt_reg_TrmB_C.
DR   InterPro; IPR002831; Tscrpt_reg_TrmB_N.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF11495; Regulator_TrmB; 1.
DR   Pfam; PF01978; TrmB; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
PE   4: Predicted;
DR   PRODOM; D7A2Y2.
DR   SWISS-2DPAGE; D7A2Y2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633}.
FT   DOMAIN       19     86       TrmB. {ECO:0000259|Pfam:PF01978}.
FT   DOMAIN      118    203       Regulator_TrmB. {ECO:0000259|Pfam:
FT                                PF11495}.
SQ   SEQUENCE   290 AA;  32006 MW;  A23779D13ACAA7F4 CRC64;
     MAGKLAIAAN ESDDLLADLK RLGFTEYEAK IYIQLLRMPP STAYEISKGA NVPRPNTYHA
     LEALAQRGAV LPVSENPVRY VAAPPNDFLA ALSNQTRALC ADLSERLSSI APSSKGEYVW
     MLRGEGNVHS KIDTLIEESD TSIWIKASDT VLRRHKEALR KAAARGIEIF IVLFGPDAEE
     FRFGPTCRVY IHEGNGVRMG TTDNLFTVSI DHIETLTATV EGEVVAAYTR NGPIVNLAES
     LVRHDYYMAE IFARLGPQID EAFGPYLRDL RLACFSPEQA ASFKKRTGLS
//

If you have problems or comments...

PBIL Back to PBIL home page