(data stored in SCRATCH zone)

SWISSPROT: D7A2Y9_STAND

ID   D7A2Y9_STAND            Unreviewed;       297 AA.
AC   D7A2Y9;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 49.
DE   SubName: Full=Citrate (Pro-3S)-lyase {ECO:0000313|EMBL:ADH87707.1};
DE            EC=4.1.3.6 {ECO:0000313|EMBL:ADH87707.1};
GN   OrderedLocusNames=Snov_0374 {ECO:0000313|EMBL:ADH87707.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87707.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87707.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
CC   -!- SIMILARITY: Belongs to the HpcH/HpaI aldolase family.
CC       {ECO:0000256|SAAS:SAAS00571010}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002026; ADH87707.1; -; Genomic_DNA.
DR   RefSeq; WP_013165212.1; NC_014217.1.
DR   STRING; 639283.Snov_0374; -.
DR   EnsemblBacteria; ADH87707; ADH87707; Snov_0374.
DR   KEGG; sno:Snov_0374; -.
DR   eggNOG; ENOG4105CI0; Bacteria.
DR   eggNOG; COG2301; LUCA.
DR   HOGENOM; HOG000242281; -.
DR   KO; K01644; -.
DR   OMA; IDEPIYK; -.
DR   OrthoDB; 1107373at2; -.
DR   BioCyc; SNOV639283:G1GLM-379-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0008815; F:citrate (pro-3S)-lyase activity; IEA:UniProtKB-EC.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   Gene3D; 3.20.20.60; -; 1.
DR   InterPro; IPR005000; Aldolase/citrate-lyase_domain.
DR   InterPro; IPR011206; Citrate_lyase_beta/mcl1/mcl2.
DR   InterPro; IPR015813; Pyrv/PenolPyrv_Kinase-like_dom.
DR   InterPro; IPR040442; Pyrv_Kinase-like_dom_sf.
DR   Pfam; PF03328; HpcH_HpaI; 1.
DR   PIRSF; PIRSF015582; Cit_lyase_B; 1.
DR   SUPFAM; SSF51621; SSF51621; 1.
PE   3: Inferred from homology;
DR   PRODOM; D7A2Y9.
DR   SWISS-2DPAGE; D7A2Y9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   Lyase {ECO:0000313|EMBL:ADH87707.1};
KW   Magnesium {ECO:0000256|PIRSR:PIRSR015582-2};
KW   Metal-binding {ECO:0000256|PIRSR:PIRSR015582-2,
KW   ECO:0000256|SAAS:SAAS00460587};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633}.
FT   DOMAIN        8    227       HpcH_HpaI. {ECO:0000259|Pfam:PF03328}.
FT   METAL       127    127       Magnesium. {ECO:0000256|PIRSR:
FT                                PIRSR015582-2}.
FT   METAL       159    159       Magnesium. {ECO:0000256|PIRSR:
FT                                PIRSR015582-2}.
FT   BINDING      69     69       Substrate. {ECO:0000256|PIRSR:
FT                                PIRSR015582-1}.
FT   BINDING     127    127       Substrate. {ECO:0000256|PIRSR:
FT                                PIRSR015582-1}.
SQ   SEQUENCE   297 AA;  31881 MW;  65CF786ED6496AE9 CRC64;
     MNGERPLRSV LYVPGIRERA LEKIRELDVD ALIIDLEDSI APEMKPQARE NACRAVSAGG
     YGFRQVAIRV NSRGTRWFED DLAAVAAAGP DIVVLSKVEA PDDIGEAHRL LRSAGAAPGL
     QLWAMIETPL GLLDLSEIVR EGRKQPDNRL AGLVLGTNDI AKDTGVLAGD DRAAMVPWLL
     NAVLVARAHG LSVFDGVYNA FTDMDGFVRE CAQGRQLGFD GKTLIHPSQI ALANRLFAPA
     DEDVAEALTI VEAFALPENA DKGVITLGGK MVERLHAMSA KRLIAIDAAI KARGSFA
//

If you have problems or comments...

PBIL Back to PBIL home page