(data stored in SCRATCH zone)

SWISSPROT: D7A306_STAND

ID   D7A306_STAND            Unreviewed;       321 AA.
AC   D7A306;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 58.
DE   SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADH87724.1};
GN   OrderedLocusNames=Snov_0391 {ECO:0000313|EMBL:ADH87724.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87724.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87724.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
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DR   EMBL; CP002026; ADH87724.1; -; Genomic_DNA.
DR   RefSeq; WP_013165229.1; NC_014217.1.
DR   STRING; 639283.Snov_0391; -.
DR   EnsemblBacteria; ADH87724; ADH87724; Snov_0391.
DR   KEGG; sno:Snov_0391; -.
DR   eggNOG; ENOG4108NAP; Bacteria.
DR   eggNOG; COG4977; LUCA.
DR   HOGENOM; HOG000063196; -.
DR   OMA; THWEDME; -.
DR   OrthoDB; 1459004at2; -.
DR   BioCyc; SNOV639283:G1GLM-396-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 3.40.50.880; -; 1.
DR   InterPro; IPR029062; Class_I_gatase-like.
DR   InterPro; IPR002818; DJ-1/PfpI.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   Pfam; PF01965; DJ-1_PfpI; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   SUPFAM; SSF52317; SSF52317; 1.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; D7A306.
DR   SWISS-2DPAGE; D7A306.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00048696};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633};
KW   Transcription {ECO:0000256|SAAS:SAAS00048810};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00048643}.
FT   DOMAIN      221    319       HTH araC/xylS-type. {ECO:0000259|PROSITE:
FT                                PS01124}.
SQ   SEQUENCE   321 AA;  34882 MW;  E4737867FDCA3270 CRC64;
     MIFAHSDEPL DVTLLLFSGL SLLSLAATLD PMRGANRVLG RAAYRWKLTS IDGQMPVASC
     GLPIPVDGAF DPSMQQDALI VVAAFDAVHH ATPRILKSLR AGATRSKIVG GIESGSWLMG
     FAGLLDGRRA TTHWEDLEDF AARFPNADVE PDRFVVDEPV FTTGGATPAL DCMLSLIRAR
     NGYSAALDVA SLYIYEEVRT GSDVQPIVSL GRIRQHEPRV AEAIRIMETH IDRPLTIAAI
     ARRVGVSTRG LETLFQKTVD VSPGVYYVTL RLNAARRLVL DTNLPIADIA ERTGFSAIAS
     LSRAYRRQFG APPSAARRTR S
//

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