(data stored in SCRATCH zone)

SWISSPROT: D7A322_STAND

ID   D7A322_STAND            Unreviewed;       449 AA.
AC   D7A322;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 51.
DE   SubName: Full=Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ADH87740.1};
GN   OrderedLocusNames=Snov_0407 {ECO:0000313|EMBL:ADH87740.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87740.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87740.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
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DR   EMBL; CP002026; ADH87740.1; -; Genomic_DNA.
DR   STRING; 639283.Snov_0407; -.
DR   EnsemblBacteria; ADH87740; ADH87740; Snov_0407.
DR   KEGG; sno:Snov_0407; -.
DR   eggNOG; ENOG4105CJJ; Bacteria.
DR   eggNOG; COG1018; LUCA.
DR   eggNOG; COG2202; LUCA.
DR   HOGENOM; HOG000012550; -.
DR   OMA; FRARHWE; -.
DR   BioCyc; SNOV639283:G1GLM-412-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0071949; F:FAD binding; IEA:InterPro.
DR   GO; GO:0020037; F:heme binding; IEA:InterPro.
DR   GO; GO:0008941; F:nitric oxide dioxygenase activity; IEA:InterPro.
DR   GO; GO:0019825; F:oxygen binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   GO; GO:0051409; P:response to nitrosative stress; IEA:InterPro.
DR   CDD; cd00130; PAS; 1.
DR   Gene3D; 3.40.50.80; -; 1.
DR   InterPro; IPR008333; Cbr1-like_FAD-bd_dom.
DR   InterPro; IPR017927; FAD-bd_FR_type.
DR   InterPro; IPR039261; FNR_nucleotide-bd.
DR   InterPro; IPR023950; Hmp.
DR   InterPro; IPR001433; OxRdtase_FAD/NAD-bd.
DR   InterPro; IPR001610; PAC.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR000700; PAS-assoc_C.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013767; PAS_fold.
DR   InterPro; IPR017938; Riboflavin_synthase-like_b-brl.
DR   PANTHER; PTHR43396; PTHR43396; 1.
DR   Pfam; PF00970; FAD_binding_6; 1.
DR   Pfam; PF00175; NAD_binding_1; 1.
DR   Pfam; PF00989; PAS; 1.
DR   SMART; SM00086; PAC; 1.
DR   SMART; SM00091; PAS; 1.
DR   SUPFAM; SSF52343; SSF52343; 1.
DR   SUPFAM; SSF55785; SSF55785; 1.
DR   SUPFAM; SSF63380; SSF63380; 1.
DR   TIGRFAMs; TIGR00229; sensory_box; 1.
DR   PROSITE; PS51384; FAD_FR; 1.
DR   PROSITE; PS50113; PAC; 1.
DR   PROSITE; PS50112; PAS; 1.
PE   4: Predicted;
DR   PRODOM; D7A322.
DR   SWISS-2DPAGE; D7A322.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633}.
FT   DOMAIN       30    134       FAD-binding FR-type.
FT                                {ECO:0000259|PROSITE:PS51384}.
FT   DOMAIN      306    359       PAS. {ECO:0000259|PROSITE:PS50112}.
FT   DOMAIN      384    436       PAC. {ECO:0000259|PROSITE:PS50113}.
SQ   SEQUENCE   449 AA;  48557 MW;  3BE73D4333904AAD CRC64;
     MHTLYMISAE ANTMTDTAAA TAQPAHVDQR GPRAFVVESR HKESEVITSF VLRPADGRPP
     APHEAGQHLT LFAEVPGHGR QKRNFTISSA PNGETYRITV KREPAGTVTK WLHDSAEPGT
     RLDIARPDGS FVLPRGDERP IVMVSAGVGL TPMVAMLEEF VREKRHVRVQ FVHCTQNGGT
     HALGKHVRDL AAASDGIETT FLYTRPESGD VAGRDFDISG HLSLDWLAAH TPLNEAEYFV
     CGPLRFLRDF VPGLAQRGVP VERLNYEFFG PVEDLFGDAT DGGTTPSPQS GTVAARTARA
     VHGFSREQIG DALLDSAADA IIASATDGTI VLWNAGAERI FGFTEEEALG QSLDIIIPEP
     FRARHWEGYD ETIASGVSRY GAGDLLAVPG LHKDGRRISI EFTIVLMKDE TGKVTGMVAA
     LRDVTARFEE TKALKKKLAA LEAATGGNS
//

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