(data stored in SCRATCH zone)

SWISSPROT: D7A333_STAND

ID   D7A333_STAND            Unreviewed;       305 AA.
AC   D7A333;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 51.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADH87751.1};
GN   OrderedLocusNames=Snov_0418 {ECO:0000313|EMBL:ADH87751.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87751.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87751.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; CP002026; ADH87751.1; -; Genomic_DNA.
DR   RefSeq; WP_013165256.1; NC_014217.1.
DR   STRING; 639283.Snov_0418; -.
DR   EnsemblBacteria; ADH87751; ADH87751; Snov_0418.
DR   KEGG; sno:Snov_0418; -.
DR   eggNOG; ENOG4105CRR; Bacteria.
DR   eggNOG; ENOG410XP61; LUCA.
DR   HOGENOM; HOG000233514; -.
DR   OMA; ASETQCT; -.
DR   OrthoDB; 990666at2; -.
DR   BioCyc; SNOV639283:G1GLM-423-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; D7A333.
DR   SWISS-2DPAGE; D7A333.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        1     58       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   305 AA;  32537 MW;  8964DBDA30E5642D CRC64;
     MELRHLQHFI AVAEEQHFTR AAQRANIVQS ALSSSIRALE EELDARLFLR TTRQVRLTAA
     GEAFLEKARR VLDAVREARE AVSSAAALER GTLDIGAVPS LPAFIDLPAL LAAFHALYPG
     IEVRLSQGGS EPLTEKLRAG TLDLAILPLC EPVPDIAASV VACEGLVLVC APAHPLAGRT
     EVTLAELAGE PFVDFQPGWG TRRLVDKGFG QAGLERRIAF EVSDLDSLLA LVARGLGVAL
     VPETVAEARR DMLAVVDIAG PDLCWELVVA HLAPGRGGMS ALDEAPRAFL DLMLSRAEPA
     KTQAA
//

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