(data stored in SCRATCH zone)

SWISSPROT: D7A358_STAND

ID   D7A358_STAND            Unreviewed;       309 AA.
AC   D7A358;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 50.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADH87776.1};
GN   OrderedLocusNames=Snov_0443 {ECO:0000313|EMBL:ADH87776.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87776.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87776.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; CP002026; ADH87776.1; -; Genomic_DNA.
DR   RefSeq; WP_013165281.1; NC_014217.1.
DR   STRING; 639283.Snov_0443; -.
DR   EnsemblBacteria; ADH87776; ADH87776; Snov_0443.
DR   KEGG; sno:Snov_0443; -.
DR   eggNOG; ENOG4105CBN; Bacteria.
DR   eggNOG; ENOG410XNVB; LUCA.
DR   HOGENOM; HOG000233519; -.
DR   OMA; LEFITVA; -.
DR   OrthoDB; 1661500at2; -.
DR   BioCyc; SNOV639283:G1GLM-448-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; D7A358.
DR   SWISS-2DPAGE; D7A358.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        1     59       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   309 AA;  34278 MW;  7A2AF7EBBF6F84DD CRC64;
     MDQIAAMRAF VRVVEAGNFS RAADLLEMPK PTITKLIQQL ESHLRTKLLN RTTRRVGVTP
     DGAAYYERAL ALLSDLDELD GSMTKAQTTP SGRLRVDVGS SLALNVLIPA LPDFHARYPD
     IQLDLGVSDR PADLVGENID CAIRGGELLD PSLIARRIGQ VELVMCATPG YIQRHGMPQH
     PRDLRDGHRV IAYFSPRTGR RFAFDMIRGE ETYELDLPYA VAVNDSTAYL AACLTGLGIA
     HAVEPMIQPY LAAGTLVPVL PEWRGEPIVL HVVYAPNRHL SSRLRVFVDW VAELFASGNV
     YRRRPEALF
//

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