(data stored in SCRATCH zone)

SWISSPROT: D7A3Z4_STAND

ID   D7A3Z4_STAND            Unreviewed;       260 AA.
AC   D7A3Z4;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 59.
DE   SubName: Full=Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ADH87814.1};
GN   OrderedLocusNames=Snov_0481 {ECO:0000313|EMBL:ADH87814.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87814.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87814.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
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DR   EMBL; CP002026; ADH87814.1; -; Genomic_DNA.
DR   RefSeq; WP_013165319.1; NC_014217.1.
DR   STRING; 639283.Snov_0481; -.
DR   EnsemblBacteria; ADH87814; ADH87814; Snov_0481.
DR   KEGG; sno:Snov_0481; -.
DR   eggNOG; ENOG4105E98; Bacteria.
DR   eggNOG; COG1349; LUCA.
DR   HOGENOM; HOG000224685; -.
DR   KO; K02444; -.
DR   OMA; QIPDHAS; -.
DR   OrthoDB; 1629121at2; -.
DR   BioCyc; SNOV639283:G1GLM-486-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR014036; DeoR_C.
DR   InterPro; IPR001034; DeoR_HTH.
DR   InterPro; IPR037171; NagB/RpiA_transferase-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00455; DeoRC; 1.
DR   Pfam; PF08220; HTH_DeoR; 1.
DR   PRINTS; PR00037; HTHLACR.
DR   SMART; SM00420; HTH_DEOR; 1.
DR   SUPFAM; SSF100950; SSF100950; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS51000; HTH_DEOR_2; 1.
PE   4: Predicted;
DR   PRODOM; D7A3Z4.
DR   SWISS-2DPAGE; D7A3Z4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01006767};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633};
KW   Transcription {ECO:0000256|SAAS:SAAS01006791};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01006775}.
FT   DOMAIN        3     58       HTH deoR-type. {ECO:0000259|PROSITE:
FT                                PS51000}.
SQ   SEQUENCE   260 AA;  28390 MW;  AA1844F6AF91ED5E CRC64;
     MNISSRQQDI LVLARAQGRV SVEDLAGRFE VSPQTIRKDL NDLCVRRLMS RVHGGAVVAS
     GVENLAYEAR RAMAQGAKRA IAEAAALMVP NRASLFINIG TTTEEVARAL ADHEDLLVIT
     NNLNVATLLY RHPKIELIMA GGPVRHADGA VIGSSAVDFI RQFRVDYAVI GASAIEEDGT
     LLDFDYREVQ VARAIIDNAR QVILVADRSK LERSAPVRIG AMSEVDTFVT DTVSSPELRH
     VCQREQVELI EVGSLDEDGF
//

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