(data stored in SCRATCH zone)

SWISSPROT: D7A468_STAND

ID   D7A468_STAND            Unreviewed;       525 AA.
AC   D7A468;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   16-JAN-2019, entry version 58.
DE   SubName: Full=Transcriptional regulator domain protein {ECO:0000313|EMBL:ADH87888.1};
GN   OrderedLocusNames=Snov_0555 {ECO:0000313|EMBL:ADH87888.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87888.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87888.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
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DR   EMBL; CP002026; ADH87888.1; -; Genomic_DNA.
DR   RefSeq; WP_013165393.1; NC_014217.1.
DR   STRING; 639283.Snov_0555; -.
DR   EnsemblBacteria; ADH87888; ADH87888; Snov_0555.
DR   KEGG; sno:Snov_0555; -.
DR   eggNOG; ENOG4108059; Bacteria.
DR   eggNOG; COG3710; LUCA.
DR   eggNOG; COG5616; LUCA.
DR   HOGENOM; HOG000225397; -.
DR   OMA; FASAYGM; -.
DR   OrthoDB; 1382732at2; -.
DR   BioCyc; SNOV639283:G1GLM-560-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0000160; P:phosphorelay signal transduction system; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   CDD; cd00383; trans_reg_C; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 1.25.40.10; -; 1.
DR   InterPro; IPR001867; OmpR/PhoB-type_DNA-bd.
DR   InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR   InterPro; IPR013026; TPR-contain_dom.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF00486; Trans_reg_C; 1.
DR   SMART; SM00028; TPR; 4.
DR   SMART; SM00862; Trans_reg_C; 1.
DR   SUPFAM; SSF46894; SSF46894; 1.
DR   SUPFAM; SSF48452; SSF48452; 1.
DR   PROSITE; PS51755; OMPR_PHOB; 1.
DR   PROSITE; PS50005; TPR; 1.
DR   PROSITE; PS50293; TPR_REGION; 1.
PE   4: Predicted;
DR   PRODOM; D7A468.
DR   SWISS-2DPAGE; D7A468.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU01091,
KW   ECO:0000256|SAAS:SAAS00529408};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633};
KW   TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339};
KW   Transcription {ECO:0000256|SAAS:SAAS00053185};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00053955}.
FT   DOMAIN        1     98       OmpR/PhoB-type. {ECO:0000259|PROSITE:
FT                                PS51755}.
FT   DOMAIN      354    493       TPR_REGION. {ECO:0000259|PROSITE:
FT                                PS50293}.
FT   REPEAT      389    422       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   DNA_BIND      1     98       OmpR/PhoB-type. {ECO:0000256|PROSITE-
FT                                ProRule:PRU01091}.
SQ   SEQUENCE   525 AA;  57980 MW;  F807E5CC974AE42A CRC64;
     MKYHFADCVL DLDRRELTRA SQSVAVGPQV FDLLVHLVEN HERVVSKDGL LDAVWNGRIV
     SESTLTSHIN AVRKAIGDSG AEQRLVRTVA RKGFRFVGDI QQVGMSEASR DAAIMPEIAI
     PATAVTAHKP SIAVMPFQNL SGDPEQDYFA DGVAEEIITA LSRVRWLFVI ARNSSFAYRG
     RAADVQQISR ELGVTYVLEG SVRKAADRIR ITGQLVNAST NGYLWADRFE GALDDIFTLQ
     DRISGNVVGA IAPQMELAEI ERARRKPTEN LSAYDCYLRG LAHLHRGGRE SVEEALPLFR
     KAIELDGEFA PPYAMAAWGY FWRKVNGWTI DPVQETAEGI ALARRGVELG RDDAVVLARA
     GHALAHLAGE FESGIGLLDR ALFLNPNLAP AWFLGGFLRV WHGEPEAAID YFEHAMRLSP
     VDPELYRMQA GIAMAHLFAG RFETASLWAD QAQRNLPSFL MAVATGAASQ ALSGRTEEAR
     RTMDQLRELA PALHISGLKD WLPIRRQEDF ALFADGLRQA GLPDK
//

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