(data stored in SCRATCH zone)

SWISSPROT: D7TDS0_VITVI

ID   D7TDS0_VITVI            Unreviewed;       200 AA.
AC   D7TDS0;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 45.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CBI28643.3};
GN   OrderedLocusNames=VIT_04s0043g00400 {ECO:0000313|EMBL:CBI28643.3};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|Proteomes:UP000009183};
RN   [1] {ECO:0000313|Proteomes:UP000009183}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX   PubMed=17721507; DOI=10.1038/nature06148;
RG   The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA   Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C.,
RA   Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A.,
RA   Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D.,
RA   Poulain J., Bruyere C., Billault A., Segurens B., Gouyvenoux M.,
RA   Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C.,
RA   Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I.,
RA   Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G.,
RA   Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D.,
RA   Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F.,
RA   Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F.,
RA   Weissenbach J., Quetier F., Wincker P.;
RT   "The grapevine genome sequence suggests ancestral hexaploidization in
RT   major angiosperm phyla.";
RL   Nature 449:463-467(2007).
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DR   EMBL; FN595763; CBI28643.3; -; Genomic_DNA.
DR   STRING; 29760.VIT_04s0043g00400.t01; -.
DR   EnsemblPlants; VIT_04s0043g00400.t01; VIT_04s0043g00400.t01; VIT_04s0043g00400.
DR   Gramene; VIT_04s0043g00400.t01; VIT_04s0043g00400.t01; VIT_04s0043g00400.
DR   eggNOG; KOG3409; Eukaryota.
DR   eggNOG; COG1096; LUCA.
DR   HOGENOM; HOG000177330; -.
DR   InParanoid; D7TDS0; -.
DR   OMA; KPGFHLT; -.
DR   Proteomes; UP000009183; Chromosome 4.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0000176; C:nuclear exosome (RNase complex); IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   InterPro; IPR039771; Csl4.
DR   InterPro; IPR019495; EXOSC1_C.
DR   InterPro; IPR025721; Exosome_cplx_N_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   PANTHER; PTHR12686; PTHR12686; 1.
DR   Pfam; PF14382; ECR1_N; 1.
DR   Pfam; PF10447; EXOSC1; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
PE   4: Predicted;
DR   PRODOM; D7TDS0.
DR   SWISS-2DPAGE; D7TDS0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000009183};
KW   Reference proteome {ECO:0000313|Proteomes:UP000009183}.
FT   DOMAIN       10     47       ECR1_N. {ECO:0000259|Pfam:PF14382}.
FT   DOMAIN      103    144       EXOSC1. {ECO:0000259|Pfam:PF10447}.
SQ   SEQUENCE   200 AA;  21334 MW;  224BDBEB650DC4F8 CRC64;
     MQEREEAEEL VTPGEVLGKG SQLKAGRGAY FLPQNGTVYA SLTGRRSLIP PSPLSSDQRP
     TVEVTGHSAH GAIPEPGSIV IARVTKVMAR MASADIMCVG PKSVREKFTG IIRQQDVRAT
     EIDKVDMHSS FRPGDIVRAL VLSLGDARAY FLSTAKNELG VVSAESAAGA TMVPMSWTEM
     QCPLTGQIEQ RKVAKVGGQA
//

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