(data stored in SCRATCH zone)

SWISSPROT: E6S8N9_INTC7

ID   E6S8N9_INTC7            Unreviewed;       282 AA.
AC   E6S8N9;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   16-JAN-2019, entry version 43.
DE   SubName: Full=RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily {ECO:0000313|EMBL:ADU47008.1};
GN   OrderedLocusNames=Intca_0460 {ECO:0000313|EMBL:ADU47008.1};
OS   Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /
OS   NBRC 12989 / 7 KIP).
OC   Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae;
OC   Intrasporangium.
OX   NCBI_TaxID=710696 {ECO:0000313|EMBL:ADU47008.1, ECO:0000313|Proteomes:UP000008914};
RN   [1] {ECO:0000313|EMBL:ADU47008.1, ECO:0000313|Proteomes:UP000008914}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP
RC   {ECO:0000313|Proteomes:UP000008914};
RX   PubMed=21304734; DOI=10.4056/sigs.1263355;
RA   Del Rio T.G., Chertkov O., Yasawong M., Lucas S., Deshpande S.,
RA   Cheng J.F., Detter C., Tapia R., Han C., Goodwin L., Pitluck S.,
RA   Liolios K., Ivanova N., Mavromatis K., Pati A., Chen A.,
RA   Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D.,
RA   Rohde M., Pukall R., Sikorski J., Goker M., Woyke T., Bristow J.,
RA   Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.,
RA   Lapidus A.;
RT   "Complete genome sequence of Intrasporangium calvum type strain (7
RT   KIP).";
RL   Stand. Genomic Sci. 3:294-303(2010).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC       {ECO:0000256|SAAS:SAAS00611284}.
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DR   EMBL; CP002343; ADU47008.1; -; Genomic_DNA.
DR   RefSeq; WP_013491329.1; NC_014830.1.
DR   STRING; 710696.Intca_0460; -.
DR   EnsemblBacteria; ADU47008; ADU47008; Intca_0460.
DR   KEGG; ica:Intca_0460; -.
DR   eggNOG; ENOG4105E65; Bacteria.
DR   eggNOG; COG1191; LUCA.
DR   HOGENOM; HOG000270270; -.
DR   KO; K03090; -.
DR   OrthoDB; 1857862at2; -.
DR   BioCyc; ICAL710696:GH9U-472-MONOMER; -.
DR   Proteomes; UP000008914; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 2.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88659; SSF88659; 2.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6S8N9.
DR   SWISS-2DPAGE; E6S8N9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008914};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008914};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       54    122       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      136    202       Sigma70_r3. {ECO:0000259|Pfam:PF04539}.
FT   DOMAIN      218    266       Sigma70_r4. {ECO:0000259|Pfam:PF04545}.
SQ   SEQUENCE   282 AA;  31497 MW;  785EEBDB1D8D7BD8 CRC64;
     MSRMKSVSPT STPTPISRRR GRFVERDRKA EELLLELSRT TNCAERERLT DEIVRLHLDL
     CDGVAARYAG RSIPTEDLVQ VARLALLVAI KRYQPGPGSS FIGYALPTIS GELKRHFRDH
     GWMVRPPRRL QELGPVLRLA REHWEQEHGT SPTTQDLAEE VGVDPEQVSE CLSAEHSYHP
     LSLDLTFGDD ESRSLAESLA EPQDELESAA DRVSLGTALS SLSQKDRELL QMRFVDGMTQ
     KEIGLALGVS QMQVSRLVRA VLDRLRTQMG VTVDDDRSAT AA
//

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