(data stored in SCRATCH zone)
SWISSPROT: E6UXU1_VARPE
ID E6UXU1_VARPE Unreviewed; 138 AA.
AC E6UXU1;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 08-MAY-2019, entry version 39.
DE SubName: Full=Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADU34285.1};
GN OrderedLocusNames=Varpa_0062 {ECO:0000313|EMBL:ADU34285.1};
OS Variovorax paradoxus (strain EPS).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34285.1, ECO:0000313|Proteomes:UP000008917};
RN [1] {ECO:0000313|Proteomes:UP000008917}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA Han J.-I.G., Woyke T.;
RT "Complete sequence of Variovorax paradoxus EPS.";
RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADU34285.1, ECO:0000313|Proteomes:UP000008917}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EPS {ECO:0000313|EMBL:ADU34285.1,
RC ECO:0000313|Proteomes:UP000008917};
RX PubMed=24158554;
RA Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT Variovorax paradoxus Strain EPS.";
RL Genome Announc. 1:e00843-13(2013).
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DR EMBL; CP002417; ADU34285.1; -; Genomic_DNA.
DR RefSeq; WP_013538532.1; NC_014931.1.
DR STRING; 595537.Varpa_0062; -.
DR EnsemblBacteria; ADU34285; ADU34285; Varpa_0062.
DR GeneID; 29718582; -.
DR KEGG; vpe:Varpa_0062; -.
DR eggNOG; ENOG4107ZKR; Bacteria.
DR eggNOG; ENOG4111JQN; LUCA.
DR HOGENOM; HOG000293547; -.
DR OMA; GCPINLT; -.
DR OrthoDB; 1919329at2; -.
DR BioCyc; VPAR595537:G1GQO-62-MONOMER; -.
DR Proteomes; UP000008917; Chromosome.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR002577; HTH_HxlR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF01638; HxlR; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR PROSITE; PS51118; HTH_HXLR; 1.
PE 4: Predicted;
DR PRODOM; E6UXU1.
DR SWISS-2DPAGE; E6UXU1.
KW Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW Reference proteome {ECO:0000313|Proteomes:UP000008917}.
FT DOMAIN 9 108 HTH hxlR-type. {ECO:0000259|PROSITE:
FT PS51118}.
SQ SEQUENCE 138 AA; 15254 MW; F0023E531CD5D3A7 CRC64;
MATAQKSLCP INLALEVFGD RWSLLIVRDM MFAGKRHFRE FLQSEEGISS NILTERLGKL
VEYGVLSKTD DPTHKQKAIY SLTPMGIDLL PVVTQIGIWG RKYTPATKES GAPAAALEKG
GPALQKTMRT ALRRAHLS
//
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