(data stored in SCRATCH zone)

SWISSPROT: E6UXU9_VARPE

ID   E6UXU9_VARPE            Unreviewed;       981 AA.
AC   E6UXU9;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 40.
DE   SubName: Full=Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:ADU34293.1};
GN   OrderedLocusNames=Varpa_0070 {ECO:0000313|EMBL:ADU34293.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34293.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34293.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34293.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002417; ADU34293.1; -; Genomic_DNA.
DR   RefSeq; WP_013538540.1; NC_014931.1.
DR   STRING; 595537.Varpa_0070; -.
DR   EnsemblBacteria; ADU34293; ADU34293; Varpa_0070.
DR   GeneID; 29716763; -.
DR   KEGG; vpe:Varpa_0070; -.
DR   eggNOG; ENOG4108V0C; Bacteria.
DR   eggNOG; ENOG410YKJV; LUCA.
DR   KO; K07126; -.
DR   OMA; HIVRRDD; -.
DR   OrthoDB; 103205at2; -.
DR   BioCyc; VPAR595537:G1GQO-69-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   Gene3D; 1.25.40.10; -; 1.
DR   InterPro; IPR006597; Sel1-like.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR032774; WG_beta_rep.
DR   Pfam; PF08238; Sel1; 4.
DR   Pfam; PF14903; WG_beta_rep; 2.
DR   SMART; SM00671; SEL1; 5.
PE   4: Predicted;
DR   PRODOM; E6UXU9.
DR   SWISS-2DPAGE; E6UXU9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917}.
SQ   SEQUENCE   981 AA;  108075 MW;  2ABB0074A60BE8F9 CRC64;
     MGNRSWLYLE HRLSGADNGA EHQKTSADEI AEANNNFPVL WQLLLADGAA GDAIDDQRVF
     GDAGTDNLAS DAHAALARIR QLHAFVEQHP MLHALPQIAL QFEALALHLA ELIDEVPADS
     APRFSANLDE LSWLGGETEG EGFIERNRRE CNERWAEVRR CIDSGNHPGV DAALGIQRFA
     DWEAWAWQFG FGGLSHPYFD GYEAPRDERF ADFEPEEDDD EDGYERPDYD NHLGGELWRF
     EVDGRWGVMR LVHDEDGDGG ASHRTTVVEP AWDDIRYAGG SDPRLLWISQ GERSGLLLAD
     AEAPRVLLEP ELDEVWDFED DIATALVGDH IGLLRTDGSW LLEPSVDEVW SFVEGRVRAR
     VGERIGYIDL QGEWAIAPRF EEAEDFTPFG LAPARGDEGG WGLVRADGEW AAPPDFEQLQ
     WRHDWEAFEA TRDGKSGLLD AQGRVVIEPV YEQVDLLEEY PIEFLTSEDN DPANERNAEA
     RPKRFAVERA DGVCGLVDGR GRVLVPFDYG RFETLEPLTG QERAHAMARR DLVRVASKGG
     RTAKNAPWLR GIYDVAAGRE LVPCRHRTLQ PLAWGTQDIG WLVADPMPRS AKVEKGQLAV
     GVLRGDGTVL HPQANPWIAA AVSVADSWLV AAVRSDLCKR WGAGEPVKAV RNDSGLYVWL
     HADGREQPHA EHMAARHAAG DLRAAYELAC HLRDGEGIEA DPREALRWMA RAAGVREPGD
     APATASSDGL PVAMCELSKM LRWDTAGLGA DAQLGRAWLL HAIAHGGADD AATQAQLGYM
     LCEGEGGERD LEGGVRHYEL AAEKNNTMAL YNLGLAYKLG EPGEPDLARA IGYFRRGHEA
     GDTAATMQLG RTLCLHAGAL AEQGHGEAEV NVLHAEALYA RQKVAEDSTQ REQGWACYEL
     GWMRFRGQGA PEDAAAAERW LLAGAALDDC EENLESQRAC TEVLAETFYG DPDSPLFDED
     KAREWTQRLQ ALPATTPDAP A
//

If you have problems or comments...

PBIL Back to PBIL home page