(data stored in SCRATCH zone)

SWISSPROT: E6UYY5_VARPE

ID   E6UYY5_VARPE            Unreviewed;       237 AA.
AC   E6UYY5;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 44.
DE   SubName: Full=Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADU34314.1};
GN   OrderedLocusNames=Varpa_0092 {ECO:0000313|EMBL:ADU34314.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34314.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34314.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34314.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
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DR   EMBL; CP002417; ADU34314.1; -; Genomic_DNA.
DR   RefSeq; WP_013538561.1; NC_014931.1.
DR   STRING; 595537.Varpa_0092; -.
DR   EnsemblBacteria; ADU34314; ADU34314; Varpa_0092.
DR   GeneID; 29716433; -.
DR   KEGG; vpe:Varpa_0092; -.
DR   eggNOG; COG0664; LUCA.
DR   HOGENOM; HOG000182990; -.
DR   OMA; DQLNARC; -.
DR   OrthoDB; 1596937at2; -.
DR   BioCyc; VPAR595537:G1GQO-89-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   CDD; cd00038; CAP_ED; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 2.60.120.10; -; 1.
DR   InterPro; IPR018490; cNMP-bd-like.
DR   InterPro; IPR000595; cNMP-bd_dom.
DR   InterPro; IPR012318; HTH_CRP.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00027; cNMP_binding; 1.
DR   Pfam; PF13545; HTH_Crp_2; 1.
DR   SMART; SM00100; cNMP; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF51206; SSF51206; 1.
DR   PROSITE; PS50042; CNMP_BINDING_3; 1.
PE   4: Predicted;
DR   PRODOM; E6UYY5.
DR   SWISS-2DPAGE; E6UYY5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00989980};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS00990022};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00990035}.
FT   DOMAIN       26    128       Cyclic nucleotide-binding.
FT                                {ECO:0000259|PROSITE:PS50042}.
SQ   SEQUENCE   237 AA;  26430 MW;  C7C13D102F3733FC CRC64;
     MATKKAEPPI TAASLTIPQL LQGSAWFPLL DATARDRVLD EMREVEVAAG AALCRRGDTP
     LHWYGTLEGL LKWSITSSDG RSVTFGGLSV GSWFGEGTLL RAVPRSADII ALRPSRVAQL
     PLETFEWLHR TQRGFDHFLL QQINERLHWF MGNYAAHRLL DADSQVARAL AGLFHPWLHP
     GSEPYLQTSQ EEIANLSGVS RQRCNAALNR LKEAGFLRIE YGGITVIDLD GLRRFIE
//

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