(data stored in SCRATCH zone)

SWISSPROT: E6UZ00_VARPE

ID   E6UZ00_VARPE            Unreviewed;       342 AA.
AC   E6UZ00;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 39.
DE   SubName: Full=Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADU34329.1};
GN   OrderedLocusNames=Varpa_0107 {ECO:0000313|EMBL:ADU34329.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34329.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34329.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34329.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
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DR   EMBL; CP002417; ADU34329.1; -; Genomic_DNA.
DR   RefSeq; WP_013538576.1; NC_014931.1.
DR   STRING; 595537.Varpa_0107; -.
DR   EnsemblBacteria; ADU34329; ADU34329; Varpa_0107.
DR   GeneID; 29718557; -.
DR   KEGG; vpe:Varpa_0107; -.
DR   eggNOG; ENOG4108TUK; Bacteria.
DR   eggNOG; COG3712; LUCA.
DR   HOGENOM; HOG000258943; -.
DR   KO; K07165; -.
DR   OMA; VATLFWR; -.
DR   OrthoDB; 1381035at2; -.
DR   BioCyc; VPAR595537:G1GQO-104-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR006860; FecR.
DR   InterPro; IPR032623; FecR_N.
DR   InterPro; IPR012373; Ferrdict_sens_TM.
DR   PANTHER; PTHR30273; PTHR30273; 1.
DR   Pfam; PF16220; DUF4880; 1.
DR   Pfam; PF04773; FecR; 1.
DR   PIRSF; PIRSF018266; FecR; 1.
PE   4: Predicted;
DR   PRODOM; E6UZ00.
DR   SWISS-2DPAGE; E6UZ00.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    102    119       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       19     62       DUF4880. {ECO:0000259|Pfam:PF16220}.
FT   DOMAIN      130    219       FecR. {ECO:0000259|Pfam:PF04773}.
SQ   SEQUENCE   342 AA;  37068 MW;  1EDE31A493648045 CRC64;
     MNRAATEGST VDIDAIAMQA AEWIVRLTAD DSAERECARE GFDAWKQADP RHAAAAAGME
     RLLGQLQTVR ESSGGHARPA HAALTASATE ARPRQSRRRR QAGATLSLAV VLGLSWMLLR
     ACPPAYLLAD MRTATGDTRA QVLPDGSRIS LDTGSAVNLH YDAGQRGIEL VRGAIRVEVA
     PDAARPFVVR TPQGSIRALG TRFIVRRDGE TTELTMLESR TTVQAGKGAE ARVIGPGQRV
     RITEVGIGPA EPVDVRSVDN AWTRRQLVAD DRPLSEVLDE LDRYHPGGIV YDRARTQGIR
     VSAVLPLDDT TRALQLLVDS FPQLRVRTLT SYLVLVDTTD PS
//

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