(data stored in SCRATCH zone)

SWISSPROT: E6UZ39_VARPE

ID   E6UZ39_VARPE            Unreviewed;       302 AA.
AC   E6UZ39;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 39.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADU34368.1};
GN   OrderedLocusNames=Varpa_0146 {ECO:0000313|EMBL:ADU34368.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34368.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34368.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34368.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
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DR   EMBL; CP002417; ADU34368.1; -; Genomic_DNA.
DR   RefSeq; WP_013538615.1; NC_014931.1.
DR   STRING; 595537.Varpa_0146; -.
DR   EnsemblBacteria; ADU34368; ADU34368; Varpa_0146.
DR   GeneID; 29716253; -.
DR   KEGG; vpe:Varpa_0146; -.
DR   eggNOG; ENOG4105F1W; Bacteria.
DR   eggNOG; COG0697; LUCA.
DR   HOGENOM; HOG000264326; -.
DR   OMA; FLYTAPF; -.
DR   OrthoDB; 1515911at2; -.
DR   BioCyc; VPAR595537:G1GQO-144-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR000620; EamA_dom.
DR   Pfam; PF00892; EamA; 2.
PE   4: Predicted;
DR   PRODOM; E6UZ39.
DR   SWISS-2DPAGE; E6UZ39.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     12     29       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     41     59       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     71     91       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     97    116       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    128    148       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    160    178       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    190    208       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    220    242       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    254    270       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    276    293       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       13    143       EamA. {ECO:0000259|Pfam:PF00892}.
FT   DOMAIN      157    293       EamA. {ECO:0000259|Pfam:PF00892}.
SQ   SEQUENCE   302 AA;  33031 MW;  859D8F05590239B9 CRC64;
     MIQRKTHLDS LAIGLLIACC AFWGLQQILI KTTVTEVPPM WQASIRMVGA TVLLWLWCAS
     RGVPLFKRDG TLWPGLLAGA LFAGEFAGIY LGLQHTSASR LTVFLYTAPF WVSLLLPRWV
     PAERLRGFQW LGLFIAFSGV VLAFSEGFGH MSSSQLIGDA MGLAAGMLWG LTTLTLRTTK
     LATASAEKTL FYQVAVTAAV CPVLSLALGE TWSFSYSSWA WTSIGLQTVI GAFASYLTWM
     WLLRHYPATQ MSSFTFLTPL FALVFGVVLL KEPLTLQLMV ALAGVALGIV LVNRRSAVQR
     TA
//

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