(data stored in SCRATCH zone)

SWISSPROT: E6V060_VARPE

ID   E6V060_VARPE            Unreviewed;       315 AA.
AC   E6V060;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 45.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU34374.1};
GN   OrderedLocusNames=Varpa_0152 {ECO:0000313|EMBL:ADU34374.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34374.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34374.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34374.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; CP002417; ADU34374.1; -; Genomic_DNA.
DR   RefSeq; WP_013538621.1; NC_014931.1.
DR   STRING; 595537.Varpa_0152; -.
DR   EnsemblBacteria; ADU34374; ADU34374; Varpa_0152.
DR   GeneID; 29714950; -.
DR   KEGG; vpe:Varpa_0152; -.
DR   eggNOG; ENOG4105PNK; Bacteria.
DR   eggNOG; ENOG4111XY8; LUCA.
DR   HOGENOM; HOG000233526; -.
DR   OMA; CLSQSAF; -.
DR   OrthoDB; 990666at2; -.
DR   BioCyc; VPAR595537:G1GQO-150-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V060.
DR   SWISS-2DPAGE; E6V060.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        1     58       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   315 AA;  34453 MW;  A4CCC7FB1F5A43E5 CRC64;
     MQLRQLQHLV ALAEQGSFGR AAQAAHLSQP AFSRSIDMLE DKLQARLVDR AYGTVRFTQA
     GELVLARARE LIADAQQIQR DVLQLQGLSI GSLAVGLGPF AASTLGRMAL SLMAQRHPQL
     LMRMEVADTV TLSERLHRRQ LDLFIADTRD LKKQPGLKLA RLPDLPVSFF VQPKHPLRRL
     KQVTLEKAMA YPLAGPNLPA EVAAHFERHV QRDTRGDGRD ERGVFNVTCD DAGTLRHLAL
     TANAVILAPH ALHAPALNTD TDTDALVPLP VAGFAGMQTH YSLVTLAGRT PSAAATVYTR
     LVTELMAPFK RPAGR
//

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