(data stored in SCRATCH zone)

SWISSPROT: E6V095_VARPE

ID   E6V095_VARPE            Unreviewed;       222 AA.
AC   E6V095;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 53.
DE   SubName: Full=Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADU34409.1};
GN   OrderedLocusNames=Varpa_0187 {ECO:0000313|EMBL:ADU34409.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34409.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34409.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34409.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032,
CC       ECO:0000256|SAAS:SAAS00758051}.
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DR   EMBL; CP002417; ADU34409.1; -; Genomic_DNA.
DR   RefSeq; WP_013538656.1; NC_014931.1.
DR   STRING; 595537.Varpa_0187; -.
DR   EnsemblBacteria; ADU34409; ADU34409; Varpa_0187.
DR   GeneID; 29720065; -.
DR   KEGG; vpe:Varpa_0187; -.
DR   eggNOG; ENOG4105E5Q; Bacteria.
DR   eggNOG; COG0765; LUCA.
DR   HOGENOM; HOG000267552; -.
DR   KO; K02029; -.
DR   OMA; AMRAIIL; -.
DR   OrthoDB; 1523519at2; -.
DR   BioCyc; VPAR595537:G1GQO-188-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0043190; C:ATP-binding cassette (ABC) transporter complex; IEA:InterPro.
DR   GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR   GO; GO:0071705; P:nitrogen compound transport; IEA:InterPro.
DR   CDD; cd06261; TM_PBP2; 1.
DR   Gene3D; 1.10.3720.10; -; 1.
DR   InterPro; IPR010065; AA_ABC_transptr_permease_3TM.
DR   InterPro; IPR000515; MetI-like.
DR   InterPro; IPR035906; MetI-like_sf.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   TIGRFAMs; TIGR01726; HEQRo_perm_3TM; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V095.
DR   SWISS-2DPAGE; E6V095.
KW   Cell membrane {ECO:0000256|SAAS:SAAS00758162};
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00758086}.
FT   TRANSMEM     20     40       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     52     78       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     84    104       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    189    208       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN       19    208       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   222 AA;  24211 MW;  EC296251A4E43E62 CRC64;
     MDLDFSPVWQ GWPDLLRGAL VTVEITACAL ALGCVLGLIV GIGRLNPKRR WIYSVCTAYV
     AVIRGTPLLV QLFILFFGLP HFGILLPAFL CGVLGLGVYS GAYVSEIVRG AIQSIDKGQT
     MAAQSLGMTP GVAMREIVLP QAVVRMIPPL GNEFIALIKN SALVSLLTIH DVMHEGQKII
     SVSYRSLEVY LAIALVYFVL TGTMTLVLRH FEQKLRQGGL MR
//

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