(data stored in SCRATCH zone)

SWISSPROT: E6V0A4_VARPE

ID   E6V0A4_VARPE            Unreviewed;       306 AA.
AC   E6V0A4;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 48.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU34418.1};
GN   OrderedLocusNames=Varpa_0196 {ECO:0000313|EMBL:ADU34418.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34418.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34418.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34418.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; CP002417; ADU34418.1; -; Genomic_DNA.
DR   RefSeq; WP_013538665.1; NC_014931.1.
DR   EnsemblBacteria; ADU34418; ADU34418; Varpa_0196.
DR   GeneID; 29714783; -.
DR   KEGG; vpe:Varpa_0196; -.
DR   eggNOG; ENOG4108NZ2; Bacteria.
DR   eggNOG; ENOG410XPIV; LUCA.
DR   HOGENOM; HOG000233520; -.
DR   OMA; KVTDMAT; -.
DR   OrthoDB; 750230at2; -.
DR   BioCyc; VPAR595537:G1GQO-197-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V0A4.
DR   SWISS-2DPAGE; E6V0A4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        3     60       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   306 AA;  32999 MW;  9AAF69E16058FCE3 CRC64;
     MAFSSDNVEV FLAVIDHGSF SAAARALHKV PSAVSMAIAG LEAELNLPLF DRKGREPQPT
     AAARSLEPQA RMLAAQLKQL QVQALALTQG LENRLTLAIA PELLAAPWSG PLAELAQEYP
     LLQVEVLAAP QADALALLHS GRAQLALVFE RPSLDGREGF QEVGSDTMVA VMAPDHPALV
     AAAGERLREE HLTNTRQIVV AGRDLATSDP RFVFARHVWR TDNALAALSL ITAGLGWGWL
     PRNFARPHVA AGALIEIPFE NLSNGLDLWV DVVWSRERPL GLGAQRFVAL IARDRQAAHA
     PKNVHP
//

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