(data stored in SCRATCH zone)

SWISSPROT: E6V0B9_VARPE

ID   E6V0B9_VARPE            Unreviewed;       401 AA.
AC   E6V0B9;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 43.
DE   SubName: Full=Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADU34433.1};
GN   OrderedLocusNames=Varpa_0211 {ECO:0000313|EMBL:ADU34433.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34433.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34433.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34433.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002417; ADU34433.1; -; Genomic_DNA.
DR   RefSeq; WP_013538680.1; NC_014931.1.
DR   STRING; 595537.Varpa_0211; -.
DR   EnsemblBacteria; ADU34433; ADU34433; Varpa_0211.
DR   GeneID; 29720166; -.
DR   KEGG; vpe:Varpa_0211; -.
DR   eggNOG; ENOG4108KNZ; Bacteria.
DR   eggNOG; ENOG410XPCX; LUCA.
DR   HOGENOM; HOG000228861; -.
DR   KO; K01999; -.
DR   OMA; KYTYRLR; -.
DR   OrthoDB; 538961at2; -.
DR   BioCyc; VPAR595537:G1GQO-212-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0006865; P:amino acid transport; IEA:InterPro.
DR   InterPro; IPR028081; Leu-bd.
DR   InterPro; IPR000709; Leu_Ile_Val-bd.
DR   InterPro; IPR028082; Peripla_BP_I.
DR   Pfam; PF13458; Peripla_BP_6; 1.
DR   PRINTS; PR00337; LEUILEVALBP.
DR   SUPFAM; SSF53822; SSF53822; 1.
PE   4: Predicted;
DR   PRODOM; E6V0B9.
DR   SWISS-2DPAGE; E6V0B9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Receptor {ECO:0000313|EMBL:ADU34433.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL        1     25       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        26    401       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5003213426.
FT   DOMAIN       43    371       Peripla_BP_6. {ECO:0000259|Pfam:PF13458}.
SQ   SEQUENCE   401 AA;  43709 MW;  5067D025C2446C64 CRC64;
     MNPLRLAFCA ASVVTLATAL VPAHAQGVIK IGEINSYKAQ PAFLEPYKKG MELAVDEINA
     KGGINGKKIE LISRDDNANP GDAVRVAEEL ISREKIDVLA GAFLSNTGLA LTDFAKQKKF
     FYLAAEPLTD KIVWSNGNKY TYRLRPSTYM QVAMLVPEAA KLKKKRWAIV YPNYEYGQSS
     AATFKTLLKA AQPDVEFVTE QAPPLGKVDS GSVVQALADA KPDAIFNVLF GADLSKFVRE
     GNTRGLFKDR EVVSVLTGEP EYLDPLKDEA PNGWIVTGYP WNGVKTPEHK AFLDAYQAKF
     KDYPRLGSVV GYSAIHSIAA GIKKAGGTDT EKLVAAFKGL QVDTPFGKIN YRAQDNQSTM
     GAYVGKTKND GGKGVMVDYV YLDGAKFQPS DDEVKKMRPA D
//

If you have problems or comments...

PBIL Back to PBIL home page