(data stored in SCRATCH zone)

SWISSPROT: E6V2D2_VARPE

ID   E6V2D2_VARPE            Unreviewed;       421 AA.
AC   E6V2D2;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 45.
DE   SubName: Full=DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ADU34563.1};
GN   OrderedLocusNames=Varpa_0341 {ECO:0000313|EMBL:ADU34563.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34563.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34563.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34563.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC       {ECO:0000256|RuleBase:RU000492}.
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DR   EMBL; CP002417; ADU34563.1; -; Genomic_DNA.
DR   RefSeq; WP_013538809.1; NC_014931.1.
DR   STRING; 595537.Varpa_0341; -.
DR   EnsemblBacteria; ADU34563; ADU34563; Varpa_0341.
DR   GeneID; 29716736; -.
DR   KEGG; vpe:Varpa_0341; -.
DR   eggNOG; ENOG4105C1J; Bacteria.
DR   eggNOG; COG0513; LUCA.
DR   HOGENOM; HOG000268807; -.
DR   OMA; FHGDKGQ; -.
DR   OrthoDB; 643629at2; -.
DR   BioCyc; VPAR595537:G1GQO-343-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   CDD; cd00079; HELICc; 1.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR   InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51195; Q_MOTIF; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V2D2.
DR   SWISS-2DPAGE; E6V2D2.
KW   ATP-binding {ECO:0000256|RuleBase:RU000492};
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Helicase {ECO:0000256|RuleBase:RU000492, ECO:0000313|EMBL:ADU34563.1};
KW   Hydrolase {ECO:0000256|RuleBase:RU000492};
KW   Nucleotide-binding {ECO:0000256|RuleBase:RU000492};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917}.
FT   DOMAIN        1     29       Q_MOTIF. {ECO:0000259|PROSITE:PS51195}.
FT   DOMAIN       32    208       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      234    384       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
FT   MOTIF         1     29       Q motif. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00552}.
SQ   SEQUENCE   421 AA;  45291 MW;  4849EFD915BF5D3F CRC64;
     MPFDSLGLAP ALVQAAAESG FAAPTAIQAA AIPPILQGRD VRGSAQTGSG KTAAFSLPLL
     QRLAAEPAQS PRRVRALVLV PTRELAAQVG ETMRSLAQHL PERLKIAIAF GGVSINPQMM
     SLRGGADIVV ATPGRLLDLV EHNALKLGAV SMLVLDEADR LFDLGFAEEL GRILALLPAQ
     RQNLLFSATF PPAIQSLADG MLRDPAVIDM QGEPGTEPNI VQRVIEVDAN RRTQLLRHLL
     KENEWERVLV FVATQHSAQI VAEKLYKNGV YAVPFHGDIA QGTRTGILAQ FKESRWDVVI
     ATDLAARGID IAQLPVVINY DLPRSPTDYI HRIGRTGRAG ESGLAISFVS ASTEAHFRLI
     EKRQGLLLPR ERIEGFEPTE VAVPLVDASG TGGIKGKRPS KKDKLRAAAQ AAQQGESEKN
     D
//

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