(data stored in SCRATCH zone)

SWISSPROT: E6V4E1_VARPE

ID   E6V4E1_VARPE            Unreviewed;       311 AA.
AC   E6V4E1;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 48.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU34687.1};
GN   OrderedLocusNames=Varpa_0465 {ECO:0000313|EMBL:ADU34687.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34687.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34687.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34687.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; CP002417; ADU34687.1; -; Genomic_DNA.
DR   RefSeq; WP_013538933.1; NC_014931.1.
DR   STRING; 595537.Varpa_0465; -.
DR   EnsemblBacteria; ADU34687; ADU34687; Varpa_0465.
DR   GeneID; 29714365; -.
DR   KEGG; vpe:Varpa_0465; -.
DR   eggNOG; ENOG4108KZS; Bacteria.
DR   eggNOG; ENOG410Z03E; LUCA.
DR   HOGENOM; HOG000233528; -.
DR   OMA; RFSDEGH; -.
DR   OrthoDB; 846433at2; -.
DR   BioCyc; VPAR595537:G1GQO-466-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V4E1.
DR   SWISS-2DPAGE; E6V4E1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN       17     74       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   311 AA;  33725 MW;  02F98AE39FAB8D9F CRC64;
     MPPANAKPSK LPSSELPPLD LLRSFEAAAR QLSFTLAAGE LHLTQSAVSR QIQQLEASLG
     VLLFERRHRA LALTEAGGVL QRAVTDSLER LRDATARVRA SAAPRQVAIT CTPGFASLWL
     IPKLARFTGT HPQVDVRLSA TLDVLDLDVS RLDLAVRFAP IARGVGPALF EESVIPLCAP
     QVAASLRALS DFSGLTLLTI EYPDHSEAPT ADWEPWLKVM GLEDLRVKST LRFTQYADAV
     AAAVAGQGVV IGRLPLLREL VRDGRLVAPL GEGAASHRGY FIEMSRRAAS NRDAQDFAQW
     LRDEAEAAQR T
//

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