(data stored in SCRATCH zone)

SWISSPROT: E6V5D6_VARPE

ID   E6V5D6_VARPE            Unreviewed;       302 AA.
AC   E6V5D6;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 48.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU34742.1};
GN   OrderedLocusNames=Varpa_0521 {ECO:0000313|EMBL:ADU34742.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34742.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34742.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34742.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; CP002417; ADU34742.1; -; Genomic_DNA.
DR   RefSeq; WP_013538988.1; NC_014931.1.
DR   STRING; 595537.Varpa_0521; -.
DR   EnsemblBacteria; ADU34742; ADU34742; Varpa_0521.
DR   GeneID; 29715509; -.
DR   KEGG; vpe:Varpa_0521; -.
DR   eggNOG; ENOG4105HJQ; Bacteria.
DR   eggNOG; ENOG410XRIM; LUCA.
DR   HOGENOM; HOG000233514; -.
DR   OMA; VAHDWDI; -.
DR   OrthoDB; 990666at2; -.
DR   BioCyc; VPAR595537:G1GQO-524-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V5D6.
DR   SWISS-2DPAGE; E6V5D6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN       11     68       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   302 AA;  32890 MW;  6065B56DCC646D16 CRC64;
     MNENFSPTFS PTIRQLRAFL AVHQLRKLSA AAQRLFVTQS AVSMLIRQLE EGLGTRLFDR
     TTRSLKPTAA ANEMLPVAER ILRDVDSLST GFRELTTLER GRVSVAITPT LATFLLPDAI
     RSFSQEHPKV RVLVNDCAPD QFISRILGEH VDFGIGTPER PGAEVEVERL MRDHLALVCR
     DDHPLAKARV VRWTDLAGHP LITVRAGYGV RPLIDGTAAD AGVALDVVNE VSFLSSAIWM
     TAIGMGASIM PSAFARAAND PSLVVKVLSA PRVSRDISLV IKRGHSLSVA ARAFIAALKK
     SL
//

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