(data stored in SCRATCH zone)

SWISSPROT: E6V5F3_VARPE

ID   E6V5F3_VARPE            Unreviewed;       944 AA.
AC   E6V5F3;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 38.
DE   SubName: Full=Type VI secretion system Vgr family protein {ECO:0000313|EMBL:ADU34759.1};
GN   OrderedLocusNames=Varpa_0538 {ECO:0000313|EMBL:ADU34759.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34759.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34759.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34759.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
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DR   EMBL; CP002417; ADU34759.1; -; Genomic_DNA.
DR   STRING; 595537.Varpa_0538; -.
DR   EnsemblBacteria; ADU34759; ADU34759; Varpa_0538.
DR   KEGG; vpe:Varpa_0538; -.
DR   eggNOG; ENOG4105CS6; Bacteria.
DR   eggNOG; COG3501; LUCA.
DR   eggNOG; COG4253; LUCA.
DR   HOGENOM; HOG000148858; -.
DR   KO; K11904; -.
DR   OMA; TIAKPRM; -.
DR   BioCyc; VPAR595537:G1GQO-540-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   Gene3D; 2.40.50.230; -; 1.
DR   InterPro; IPR018769; DUF2345_Vgr_C.
DR   InterPro; IPR028244; T6SS_Rhs_Vgr_dom.
DR   InterPro; IPR017847; T6SS_RhsGE_Vgr_subset.
DR   InterPro; IPR006533; T6SS_Vgr_RhsGE.
DR   InterPro; IPR037026; Vgr_OB-fold_dom_sf.
DR   Pfam; PF10106; DUF2345; 1.
DR   Pfam; PF13296; T6SS_Vgr; 1.
DR   TIGRFAMs; TIGR01646; vgr_GE; 1.
DR   TIGRFAMs; TIGR03361; VI_Rhs_Vgr; 1.
PE   4: Predicted;
DR   PRODOM; E6V5F3.
DR   SWISS-2DPAGE; E6V5F3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917}.
FT   DOMAIN      535    639       T6SS_Vgr. {ECO:0000259|Pfam:PF13296}.
FT   DOMAIN      671    818       DUF2345. {ECO:0000259|Pfam:PF10106}.
SQ   SEQUENCE   944 AA;  103398 MW;  F3B35C7AD380DDD4 CRC64;
     MQRTLSIQSP AIPVLLGQPT LEAVRLSGNE GINSLFAYEL LLKTPDALNL GASGAMDFDL
     DLFIGREITC LIQLDGAGQF VPSVAGQALD HIGAGVRQIN ALITDVEVWG EEGRHVQYKL
     TLRPWLHLAT LTTDCRIYQN KTVVQILDEL LASYDFPVDK RLIETYPTRD YQVQFNESDF
     EFFERLTQSW GISYFFQHSE GKHRLVLIDN MGAYRKNDSA AYQKVEYHAP GWKVDAEYVS
     SFVPHHHLTS GRYASREYDY MRPRADLSQG RKEPRATGQA DGEVYQWHEG SAAGSHYAQP
     RAGSAEANDP HGEGHRLALL RMEALRTHGA RARASGNLRG MVPGCSFQLT KHPRQKANAE
     YLLLDTRFLI EDVAQDSQIG DAAPGRKQQW KVEVDFTAHP MAEPLRPVPT RPKPLTHGPQ
     TARVVGPPGQ NIWTDKWGRI KVQFPWDRIG NEDQHSSCWI RVNLHGAGNQ QGSIHVPRIG
     QEVIVDFVGG DPDLPICTGR VYNQANEPPW ALPHHSALSG YRSRELTDNG GNSSAGRSNH
     IAMDDTKGKI QVQIKSDHQH SQLSLGHITR IEDNAGRKDH RGQGLELRTD GHGAIRAAQG
     LLITTEGRAN ARAHITDMDE TAARLTAAHE QHEGLSGAAL QTEAHSTGDQ DEVIQSIKAQ
     NDAIKSTAAA GKDRFPELAD PHLVLASPAG IETTTSQSTH IASAEHNALT SGGHTSVSAA
     KSFLVSAKQA VRLFAYQAGL RLFAFGGNID IKALKESINI LAKLDIVQVA NRITITAKEE
     LVLNGGGSTI RLNAAGIEDA TSGKHVEHAA VHSMVGPKNA PPRSVSGMSS LDLKKKGALS
     FVLLSHAQDG RPLGFEPYTL YRDGANVADG VTDADGQVLI EDHQSDTTSY KVRLANGNEY
     ELPVKAQLKS NDDRLAASGY RAAHSDTKNR MQHYLRHRDD EGNS
//

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