(data stored in SCRATCH zone)

SWISSPROT: E6V5G2_VARPE

ID   E6V5G2_VARPE            Unreviewed;       359 AA.
AC   E6V5G2;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 31.
DE   SubName: Full=ABC-type uncharacterized transport system periplasmic component-like protein {ECO:0000313|EMBL:ADU34768.1};
GN   OrderedLocusNames=Varpa_0547 {ECO:0000313|EMBL:ADU34768.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34768.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34768.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34768.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002417; ADU34768.1; -; Genomic_DNA.
DR   STRING; 595537.Varpa_0547; -.
DR   EnsemblBacteria; ADU34768; ADU34768; Varpa_0547.
DR   KEGG; vpe:Varpa_0547; -.
DR   HOGENOM; HOG000156927; -.
DR   OMA; QMALIGP; -.
DR   Proteomes; UP000008917; Chromosome.
DR   InterPro; IPR007487; ABC_transpt-bd.
DR   PANTHER; PTHR35271; PTHR35271; 1.
DR   Pfam; PF04392; ABC_sub_bind; 1.
PE   4: Predicted;
DR   PRODOM; E6V5G2.
DR   SWISS-2DPAGE; E6V5G2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917}.
SQ   SEQUENCE   359 AA;  37158 MW;  11CB3CC373A09420 CRC64;
     MSVVAKHLFH PFPGRLRGAV RAALAFGLTA GVAVGLLGLS MASRAAAAPS LTVLMSDDNP
     AHSEFVQQLR AGQEPGGRFE LVRLSPTGEM PQGVETASAE TEPRANAGVR TRSMRPSAAD
     ANLTMAVGAA AARAAVERPG QEPLVLAMLS RLDYEALKAA SPALKRGDRR VGVLLRDPAM
     ADQLALIHAV LPQKHRIGVV ATPESEPLVR ELQRAAQGAN PAWEVRVEYA PDARSLAAAL
     RTVVPMSDAL MVLPDLIGDN QAATLSVLRA GASAGLAVFG ASEGLVRSGG LAAAVSTPSQ
     LAQQARLLGQ KVAVAGSSNS PLVEAATPAT VRVNATVARG LGLRLPEERE LTDRLAAPR
//

If you have problems or comments...

PBIL Back to PBIL home page