(data stored in SCRATCH zone)

SWISSPROT: F4K7X7_ARATH

ID   F4K7X7_ARATH            Unreviewed;       206 AA.
AC   F4K7X7;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   08-MAY-2019, entry version 14.
DE   SubName: Full=RING/FYVE/PHD zinc finger superfamily protein {ECO:0000313|EMBL:AED90294.2};
GN   OrderedLocusNames=At5g01070 {ECO:0000313|EMBL:AED90294.2};
GN   ORFNames=F7J8.50 {ECO:0000313|EMBL:AED90294.2}, F7J8_50
GN   {ECO:0000313|EMBL:AED90294.2};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702 {ECO:0000313|EMBL:AED90294.2, ECO:0000313|Proteomes:UP000006548};
RN   [1] {ECO:0000313|EMBL:AED90294.2, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130714; DOI=10.1038/35048507;
RG   Kazusa DNA Research Institute;
RG   Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG   European Union Arabidopsis Genome Sequencing Consortium;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
RA   Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
RA   Bevan M., Fransz P.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [2] {ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana
RT   reference genome.";
RL   Plant J. 89:789-804(2017).
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DR   EMBL; CP002688; AED90294.2; -; Genomic_DNA.
DR   RefSeq; NP_001154689.1; NM_001161217.2.
DR   SMR; F4K7X7; -.
DR   STRING; 3702.AT5G01070.2; -.
DR   EnsemblPlants; AT5G01070.1; AT5G01070.1; AT5G01070.
DR   GeneID; 831898; -.
DR   Gramene; AT5G01070.1; AT5G01070.1; AT5G01070.
DR   KEGG; ath:AT5G01070; -.
DR   eggNOG; KOG1609; Eukaryota.
DR   eggNOG; COG5183; LUCA.
DR   HOGENOM; HOG000238468; -.
DR   OMA; ICRSIAQ; -.
DR   OrthoDB; 1199709at2759; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; F4K7X7; baseline and differential.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   Gene3D; 3.30.40.10; -; 1.
DR   InterPro; IPR011016; Znf_RING-CH.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   Pfam; PF12906; RINGv; 1.
DR   SMART; SM00744; RINGv; 1.
DR   PROSITE; PS51292; ZF_RING_CH; 1.
PE   4: Predicted;
DR   PRODOM; F4K7X7.
DR   SWISS-2DPAGE; F4K7X7.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006548};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|SAAS:SAAS00560411};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Zinc {ECO:0000256|SAAS:SAAS00560438};
KW   Zinc-finger {ECO:0000256|SAAS:SAAS00560408}.
FT   TRANSMEM    180    198       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       70    136       RING-CH-type. {ECO:0000259|PROSITE:
FT                                PS51292}.
SQ   SEQUENCE   206 AA;  23083 MW;  20041F6EF0A9FEC4 CRC64;
     MSSYEISHID LENGSGERQY RPSDVSGEDS SSCDYDYDFH SAVRSFCGEF EIADDLDDET
     DTESVASGSI RGSPEKDCRI CHLGLESSRH ECGDPMVLGC SCKDDLGYVH KQCADTWFKI
     KGNKTCEICR SIAQNFFKVD NEIGQTTVET NVDDVEAGNT PTMVATSDSD DRRLCRGNRF
     LNFLLTCMVC AFVISWFFHF NLPSHK
//

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