(data stored in SCRATCH zone)

SWISSPROT: O64614_ARATH

ID   O64614_ARATH            Unreviewed;       281 AA.
AC   O64614;
DT   01-AUG-1998, integrated into UniProtKB/TrEMBL.
DT   01-AUG-1998, sequence version 1.
DT   07-JUN-2017, entry version 109.
DE   RecName: Full=Protein YIPF {ECO:0000256|RuleBase:RU361264};
GN   Name=MSF3.22 {ECO:0000313|EMBL:AEC06812.1};
GN   Synonyms=MSF3_22 {ECO:0000313|EMBL:AEC06812.1}, YIP4a
GN   {ECO:0000313|EMBL:AEC06812.1}, YPT {ECO:0000313|EMBL:AEC06812.1};
GN   OrderedLocusNames=At2g18840 {ECO:0000313|Araport:AT2G18840,
GN   ECO:0000313|EMBL:AEC06812.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1] {ECO:0000313|EMBL:AEC06812.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D.,
RA   Fujii C.Y., Mason T., Bowman C.L., Barnstead M., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J., Ronning C.M., Koo H.L., Moffat K.S.,
RA   Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA   Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA   Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA   Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 402:761-768(1999).
RN   [2] {ECO:0000313|EMBL:AAM14883.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Rounsley S.D., Lin X., Ketchum K.A., Crosby M.L., Brandon R.C.,
RA   Sykes S.M., Kaul S., Mason T.M., Kerlavage A.R., Adams M.D.,
RA   Somerville C.R., Venter J.C.;
RL   Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:AAD08953.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Lin X., Kaul S., Shea T.P., Shen M., Barnstead M.E., Fujii C.Y.,
RA   Mason T.M., Bowman C.L., Ronning C.M., Benito M.-I., Carrera A.J.,
RA   Creasy T.H., Buell C.R., Town C.D., Nierman W.C., Fraser C.M.,
RA   Venter J.C.;
RL   Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:AAD08953.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Town C.D., Kaul S.;
RL   Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:ABD19685.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Shinn P., Chen H., Kim C.J., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:AEC06812.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000313|EMBL:AEC06812.1, ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU361264};
CC       Multi-pass membrane protein {ECO:0000256|RuleBase:RU361264}.
CC   -!- SIMILARITY: Belongs to the YIP1 family.
CC       {ECO:0000256|RuleBase:RU361264}.
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DR   EMBL; AC005724; AAD08953.1; -; Genomic_DNA.
DR   EMBL; AC003673; AAM14883.1; -; Genomic_DNA.
DR   EMBL; BT024504; ABD19685.1; -; mRNA.
DR   EMBL; CP002685; AEC06812.1; -; Genomic_DNA.
DR   PIR; T01612; T01612.
DR   RefSeq; NP_565442.1; NM_127440.4.
DR   UniGene; At.27914; -.
DR   UniGene; At.74811; -.
DR   STRING; 3702.AT2G18840.1; -.
DR   TCDB; 9.B.135.1.2; the membrane trafficking yip (yip) family.
DR   EnsemblPlants; AT2G18840.1; AT2G18840.1; AT2G18840.
DR   GeneID; 816399; -.
DR   Gramene; AT2G18840.1; AT2G18840.1; AT2G18840.
DR   KEGG; ath:AT2G18840; -.
DR   Araport; AT2G18840; -.
DR   TAIR; locus:2044455; AT2G18840.
DR   eggNOG; KOG2946; Eukaryota.
DR   eggNOG; COG5080; LUCA.
DR   HOGENOM; HOG000163579; -.
DR   OMA; GVFAMVW; -.
DR   OrthoDB; EOG09360OUJ; -.
DR   Proteomes; UP000006548; Chromosome 2.
DR   GO; GO:0005794; C:Golgi apparatus; IDA:TAIR.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-UniRule.
DR   GO; GO:0005802; C:trans-Golgi network; IDA:TAIR.
DR   GO; GO:0015774; P:polysaccharide transport; IGI:TAIR.
DR   InterPro; IPR006977; Yip1.
DR   Pfam; PF04893; Yip1; 1.
PE   2: Evidence at transcript level;
DR   PRODOM; O64614.
DR   SWISS-2DPAGE; O64614.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006548};
KW   Membrane {ECO:0000256|RuleBase:RU361264};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW   Transmembrane {ECO:0000256|RuleBase:RU361264};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU361264}.
FT   TRANSMEM    148    166       Helical. {ECO:0000256|RuleBase:RU361264}.
FT   TRANSMEM    173    194       Helical. {ECO:0000256|RuleBase:RU361264}.
FT   TRANSMEM    200    221       Helical. {ECO:0000256|RuleBase:RU361264}.
FT   TRANSMEM    228    249       Helical. {ECO:0000256|RuleBase:RU361264}.
FT   TRANSMEM    261    280       Helical. {ECO:0000256|RuleBase:RU361264}.
FT   DOMAIN      131    262       Yip1. {ECO:0000259|Pfam:PF04893}.
SQ   SEQUENCE   281 AA;  30250 MW;  01D8E1E657017275 CRC64;
     MSQGDTVPLH PSSQSDIDEI ENLINESVQS GPGTVLAARP PSPTRPSIPV SSSSSSSPFM
     QSNLPPLHPS SSAQKVTHVP VPPPLPAVSN SSNFQGASAF GSPPNTLTEP VWDTVKRDLS
     RIVSNLKLVV FPNPYREDPG KALRDWDLWG PFFFIVFLGL TLSWSASVKK SEVFAVAFAL
     LAAGAVILTL NVLLLGGHII FFQSLSLLGY CLFPLDVGAV ICMLKDNVIL KMVVVSVTLA
     WSSWAAYPFM SSAVNPRRKA LALYPVFLMY VSVGFLIIAI N
//

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