(data stored in SCRATCH zone)

SWISSPROT: Q037D7_LACP3

ID   Q037D7_LACP3            Unreviewed;       276 AA.
AC   Q037D7;
DT   14-NOV-2006, integrated into UniProtKB/TrEMBL.
DT   14-NOV-2006, sequence version 1.
DT   11-DEC-2019, entry version 70.
DE   SubName: Full=Transposase {ECO:0000313|EMBL:ABJ70685.1};
GN   OrderedLocusNames=LSEI_0597 {ECO:0000313|EMBL:ABJ69441.1}, LSEI_1927
GN   {ECO:0000313|EMBL:ABJ70685.1};
GN   ORFNames=Lcas023 {ECO:0000313|EMBL:ABD83377.1};
OS   Lactobacillus paracasei (strain ATCC 334 / BCRC 17002 / CIP 107868 /
OS   KCTC 3260 / NRRL B-441).
OC   Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
OC   Lactobacillus.
OX   NCBI_TaxID=321967 {ECO:0000313|EMBL:ABJ70685.1, ECO:0000313|Proteomes:UP000001651};
RN   [1] {ECO:0000313|EMBL:ABD83377.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=ATCC 334 {ECO:0000313|EMBL:ABD83377.1};
RX   PubMed=16672450; DOI=10.1128/AEM.72.5.3130-3146.2006;
RA   Ventura M., Canchaya C., Bernini V., Altermann E., Barrangou R.,
RA   McGrath S., Claesson M.J., Li Y., Leahy S., Walker C.D., Zink R.,
RA   Neviani E., Steele J., Broadbent J., Klaenhammer T.R., Fitzgerald G.F.,
RA   O'Toole P.W., van Sinderen D.;
RT   "Comparative genomics and transcriptional analysis of prophages identified
RT   in the genomes of Lactobacillus gasseri, Lactobacillus salivarius, and
RT   Lactobacillus casei.";
RL   Appl. Environ. Microbiol. 72:3130-3146(2006).
RN   [2] {ECO:0000313|EMBL:ABJ70685.1, ECO:0000313|Proteomes:UP000001651}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 334 {ECO:0000313|EMBL:ABJ70685.1}, and ATCC 334 / BCRC
RC   17002 / CIP 107868 / KCTC 3260 / NRRL B-441
RC   {ECO:0000313|Proteomes:UP000001651};
RX   PubMed=17030793; DOI=10.1073/pnas.0607117103;
RA   Makarova K., Slesarev A., Wolf Y., Sorokin A., Mirkin B., Koonin E.,
RA   Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V.,
RA   Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M.,
RA   Hawkins T., Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A.,
RA   Baldwin K., Lee J.H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W.,
RA   Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y.,
RA   Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J., Hutkins R.,
RA   O'Sullivan D., Steele J., Unlu G., Saier M., Klaenhammer T., Richardson P.,
RA   Kozyavkin S., Weimer B., Mills D.;
RT   "Comparative genomics of the lactic acid bacteria.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006).
RN   [3] {ECO:0000313|EMBL:ABD83377.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=ATCC 334 {ECO:0000313|EMBL:ABD83377.1};
RA   Broadbent J.R., Steele J.L., Ventura M.;
RL   Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; DQ411856; ABD83377.1; -; Genomic_DNA.
DR   EMBL; CP000423; ABJ69441.1; -; Genomic_DNA.
DR   EMBL; CP000423; ABJ70685.1; -; Genomic_DNA.
DR   RefSeq; WP_003569078.1; NC_008526.1.
DR   RefSeq; YP_805883.1; NC_008526.1.
DR   RefSeq; YP_807127.1; NC_008526.1.
DR   EnsemblBacteria; ABJ69441; ABJ69441; LSEI_0597.
DR   EnsemblBacteria; ABJ70685; ABJ70685; LSEI_1927.
DR   GeneID; 4419271; -.
DR   GeneID; 4420474; -.
DR   KEGG; lca:LSEI_0597; -.
DR   KEGG; lca:LSEI_1927; -.
DR   PATRIC; fig|321967.11.peg.1902; -.
DR   HOGENOM; HOG000023132; -.
DR   OMA; MDITYLK; -.
DR   BioCyc; LCAS321967:GH4S-578-MONOMER; -.
DR   Proteomes; UP000001651; Chromosome.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR025948; HTH-like_dom.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   Pfam; PF13276; HTH_21; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
DR   PRODOM; Q037D7.
DR   SWISS-2DPAGE; Q037D7.
KW   Reference proteome {ECO:0000313|Proteomes:UP000001651}.
FT   DOMAIN          107..276
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
SQ   SEQUENCE   276 AA;  32701 MW;  05B7A8107BB5F919 CRC64;
     MIQDQLSRGH RITVILRALR IPSSTYYDWL KWHPKSRNRR RIKLKELVQV LWQRRKFYGY
     VRIAKRIRKL LKCRLSDRTI WKVMRELGIQ STMYRKRSKK PTTTTDMPQK PNLMRHLADL
     SEVVTTDITY IQLINQKWVY LATAYDPKAR KVLAWQVGQQ MTQDLAVAPI QALIHQGYTF
     KMVHSDMGSQ YTSRLFETTL TDAHLRHSYS RKGKPADNGR IEAYHSLLKR EWVRLEQINY
     ESILDVTESI ARYNTFYNHD RETNGRGACK RKSAAA
//

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