(data stored in SCRATCH zone)

SWISSPROT: Q13DK6_RHOPS

ID   Q13DK6_RHOPS            Unreviewed;       385 AA.
AC   Q13DK6;
DT   31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2006, sequence version 1.
DT   08-MAY-2019, entry version 77.
DE   SubName: Full=Ubiquinol oxidase, subunit II {ECO:0000313|EMBL:ABE37833.1};
GN   OrderedLocusNames=RPD_0595 {ECO:0000313|EMBL:ABE37833.1};
OS   Rhodopseudomonas palustris (strain BisB5).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Rhodopseudomonas.
OX   NCBI_TaxID=316057 {ECO:0000313|EMBL:ABE37833.1, ECO:0000313|Proteomes:UP000001818};
RN   [1] {ECO:0000313|EMBL:ABE37833.1, ECO:0000313|Proteomes:UP000001818}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BisB5 {ECO:0000313|EMBL:ABE37833.1,
RC   ECO:0000313|Proteomes:UP000001818};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Pelletier D.A., Kyrpides N.,
RA   Lykidis A., Oda Y., Harwood C.S., Richardson P.;
RT   "Complete sequence of Rhodopseudomonas palustris BisB5.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000283; ABE37833.1; -; Genomic_DNA.
DR   RefSeq; WP_011501020.1; NC_007958.1.
DR   STRING; 316057.RPD_0595; -.
DR   EnsemblBacteria; ABE37833; ABE37833; RPD_0595.
DR   KEGG; rpd:RPD_0595; -.
DR   eggNOG; ENOG4105E2S; Bacteria.
DR   eggNOG; COG1622; LUCA.
DR   HOGENOM; HOG000084157; -.
DR   KO; K02297; -.
DR   OMA; TAMNSFF; -.
DR   OrthoDB; 1654242at2; -.
DR   BioCyc; RPAL316057:RPD_RS03055-MONOMER; -.
DR   Proteomes; UP000001818; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005507; F:copper ion binding; IEA:InterPro.
DR   GO; GO:0008827; F:cytochrome o ubiquinol oxidase activity; IEA:InterPro.
DR   GO; GO:0004129; F:cytochrome-c oxidase activity; IEA:InterPro.
DR   CDD; cd04212; CuRO_UO_II; 1.
DR   Gene3D; 1.10.287.90; -; 1.
DR   Gene3D; 2.60.40.420; -; 1.
DR   InterPro; IPR002429; CcO_II-like_C.
DR   InterPro; IPR010514; COX_ARM.
DR   InterPro; IPR008972; Cupredoxin.
DR   InterPro; IPR034227; CuRO_UO_II.
DR   InterPro; IPR011759; Cyt_c_oxidase_su2_TM_dom.
DR   InterPro; IPR036257; Cyt_c_oxidase_su2_TM_sf.
DR   InterPro; IPR006333; Cyt_o_ubiquinol_oxidase_su2.
DR   Pfam; PF00116; COX2; 1.
DR   Pfam; PF06481; COX_ARM; 1.
DR   SUPFAM; SSF49503; SSF49503; 1.
DR   SUPFAM; SSF81464; SSF81464; 1.
DR   TIGRFAMs; TIGR01433; CyoA; 1.
DR   PROSITE; PS50857; COX2_CUA; 1.
DR   PROSITE; PS50999; COX2_TM; 1.
PE   4: Predicted;
DR   PRODOM; Q13DK6.
DR   SWISS-2DPAGE; Q13DK6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001818};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     37     61       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     82    104       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       15    112       COX2_TM. {ECO:0000259|PROSITE:PS50999}.
FT   DOMAIN      127    239       COX2_CUA. {ECO:0000259|PROSITE:PS50857}.
SQ   SEQUENCE   385 AA;  41616 MW;  74C2414E213D2D89 CRC64;
     MSRFKILALL PLAVLLGGCD FVVLAPAGDV AAQQRDLIVI STVLMLLIVL PVMALTVWFA
     WRYRHSNEAA RYDPDWDHST GLELVIWSAP LAIIICLGAI TWMGTHLLDP YRSLDRIAAD
     RPIDRAKTPL EVNVVALDWK WLFIYPEYGI ASLNELAAPV DRPINFRITA SSVMNSFYIP
     ALAGQIYAMP GMETKLHAVV NHAGKYKGFS ANYSGAGFSG MQFAFHGVDD SGFEQWVART
     RASGNSLGRT EYLALERPSS NEPARGFGSV DSDLYRAILN MCVDPGKMCM SEMMAIDARG
     GLGLAGLNNT LPIAYDKYAR RGTALGPQPA FVAGTCTIAE PQGRITAQAR ESTPLLGAGL
     KRPSLFTPPG SSTSLPLGAT SKSDS
//

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