(data stored in SCRATCH zone)

SWISSPROT: Q13F30_RHOPS

ID   Q13F30_RHOPS            Unreviewed;       621 AA.
AC   Q13F30;
DT   31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2006, sequence version 1.
DT   08-MAY-2019, entry version 90.
DE   RecName: Full=Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00023233};
DE   AltName: Full=Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810};
DE   AltName: Full=Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810};
DE   AltName: Full=Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810};
GN   Name=yidC {ECO:0000256|HAMAP-Rule:MF_01810};
GN   OrderedLocusNames=RPD_0069 {ECO:0000313|EMBL:ABE37309.1};
OS   Rhodopseudomonas palustris (strain BisB5).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Rhodopseudomonas.
OX   NCBI_TaxID=316057 {ECO:0000313|EMBL:ABE37309.1, ECO:0000313|Proteomes:UP000001818};
RN   [1] {ECO:0000313|EMBL:ABE37309.1, ECO:0000313|Proteomes:UP000001818}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BisB5 {ECO:0000313|EMBL:ABE37309.1,
RC   ECO:0000313|Proteomes:UP000001818};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Pelletier D.A., Kyrpides N.,
RA   Lykidis A., Oda Y., Harwood C.S., Richardson P.;
RT   "Complete sequence of Rhodopseudomonas palustris BisB5.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Required for the insertion and/or proper folding and/or
CC       complex formation of integral membrane proteins into the membrane.
CC       Involved in integration of membrane proteins that insert both
CC       dependently and independently of the Sec translocase complex, as
CC       well as at least some lipoproteins. Aids folding of multispanning
CC       membrane proteins. {ECO:0000256|HAMAP-Rule:MF_01810,
CC       ECO:0000256|SAAS:SAAS01014178}.
CC   -!- SUBUNIT: Interacts with the Sec translocase complex via SecD.
CC       Specifically interacts with transmembrane segments of nascent
CC       integral membrane proteins during membrane integration.
CC       {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS01014163}.
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01810}; Multi-pass membrane protein {ECO:0000256|HAMAP-
CC       Rule:MF_01810}.
CC   -!- SIMILARITY: Belongs to the OXA1/ALB3/YidC family. Type 1
CC       subfamily. {ECO:0000256|HAMAP-Rule:MF_01810,
CC       ECO:0000256|SAAS:SAAS00536017}.
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DR   EMBL; CP000283; ABE37309.1; -; Genomic_DNA.
DR   RefSeq; WP_011500502.1; NC_007958.1.
DR   STRING; 316057.RPD_0069; -.
DR   EnsemblBacteria; ABE37309; ABE37309; RPD_0069.
DR   KEGG; rpd:RPD_0069; -.
DR   eggNOG; ENOG4105DHW; Bacteria.
DR   eggNOG; COG0706; LUCA.
DR   HOGENOM; HOG000101821; -.
DR   KO; K03217; -.
DR   OMA; INPVAGC; -.
DR   OrthoDB; 524437at2; -.
DR   BioCyc; RPAL316057:RPD_RS00345-MONOMER; -.
DR   Proteomes; UP000001818; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0032977; F:membrane insertase activity; IEA:InterPro.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   Gene3D; 2.70.98.90; -; 1.
DR   HAMAP; MF_01810; YidC_type1; 1.
DR   InterPro; IPR019998; Membr_insert_YidC.
DR   InterPro; IPR028055; Membr_insert_YidC/Oxa1_C.
DR   InterPro; IPR028053; Membr_insert_YidC_N.
DR   InterPro; IPR001708; YidC/ALB3/OXA1/COX18.
DR   InterPro; IPR038210; YidC_periplasmic.
DR   InterPro; IPR038221; YidC_periplasmic_sf.
DR   PANTHER; PTHR12428; PTHR12428; 1.
DR   Pfam; PF02096; 60KD_IMP; 1.
DR   Pfam; PF14849; YidC_periplas; 1.
DR   PRINTS; PR00701; 60KDINNERMP.
DR   PRINTS; PR01900; YIDCPROTEIN.
DR   TIGRFAMs; TIGR03593; yidC_nterm; 1.
DR   TIGRFAMs; TIGR03592; yidC_oxa1_cterm; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q13F30.
DR   SWISS-2DPAGE; Q13F30.
KW   Cell inner membrane {ECO:0000256|HAMAP-Rule:MF_01810};
KW   Cell membrane {ECO:0000256|HAMAP-Rule:MF_01810,
KW   ECO:0000256|SAAS:SAAS00417312};
KW   Chaperone {ECO:0000256|HAMAP-Rule:MF_01810,
KW   ECO:0000256|SAAS:SAAS00417353}; Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001818};
KW   Membrane {ECO:0000256|HAMAP-Rule:MF_01810,
KW   ECO:0000256|SAAS:SAAS00474783};
KW   Protein transport {ECO:0000256|HAMAP-Rule:MF_01810,
KW   ECO:0000256|SAAS:SAAS00417314};
KW   Transmembrane {ECO:0000256|HAMAP-Rule:MF_01810,
KW   ECO:0000256|SAAS:SAAS00115425};
KW   Transmembrane helix {ECO:0000256|HAMAP-Rule:MF_01810,
KW   ECO:0000256|SAAS:SAAS00474747};
KW   Transport {ECO:0000256|HAMAP-Rule:MF_01810,
KW   ECO:0000256|SAAS:SAAS00023258}.
FT   TRANSMEM      6     25       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01810}.
FT   TRANSMEM    395    414       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01810}.
FT   TRANSMEM    524    543       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01810}.
FT   TRANSMEM    559    584       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01810}.
FT   DOMAIN       94    382       YidC_periplas. {ECO:0000259|Pfam:
FT                                PF14849}.
FT   COILED       29     49       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   621 AA;  68585 MW;  8EF262364EEBE985 CRC64;
     MTDNRNTILA VILSGLVLLG WQYFFNIPQM EKQRAAQQAQ QQQEAAKQQT PPAATTPGAP
     NAPAAPGAPG APANQPAANA PVVSRDAAIA ASPRIKVETP RLDGTLSLKG ARIDDLSLSQ
     YHETVDPKSA PIHLFSPSGS ANPYYAEFGW VGAAGSNVKL PDQNTLWEQE GSGALTPANP
     VTLKWDNGEG LTFRRQIAVD DRYLFTIKDD VTNVGGGPVT LYPFALISRH GTPHVEGFYI
     LHEGLIGYLG EQGLQEYGYA KIDEAKTVGF KATNAWMGIT DKYWASALLP DTNAQLQARF
     SSNQVGATRT YQTDYLEDAK TVPIGGTATA TARLFAGAKE ARVVGINFPF AGLGGYNQQL
     GLNHFDLLID WGWFYFITKP MFLALDFFFH LVGNFGVAIL LVTVLVKLIF LPLANKSYAS
     MAKMKAIQPQ LLALKERHPD DKAKQQQEMM EIYRKEKINP VAGCLPVLLQ IPVFFSLYKV
     LFVTIEMRHA PFFGWIHDLS AADPTNLFNL FGLIPYDPST LPVIGSYLVL GVWPLVMGFT
     MWFQMKLNPQ PPDPTQQMIF AWMPVIFTFM LAHFPAGLVI YWAWNNTLSV IQQAYIMRRN
     GVKVELWDNL KSAVVKPKKT A
//

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