(data stored in SCRATCH zone)

SWISSPROT: Q13HT4_PARXL

ID   Q13HT4_PARXL            Unreviewed;       385 AA.
AC   Q13HT4;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   16-JAN-2019, entry version 63.
DE   SubName: Full=Putative type IV secretion system protein VirB6/TraH {ECO:0000313|EMBL:ABE36355.1};
GN   ORFNames=Bxe_C0451 {ECO:0000313|EMBL:ABE36355.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE36355.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE36355.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE36355.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000272; ABE36355.1; -; Genomic_DNA.
DR   RefSeq; WP_011493611.1; NZ_CP008761.1.
DR   STRING; 266265.Bxe_C0451; -.
DR   EnsemblBacteria; ABE36355; ABE36355; Bxe_C0451.
DR   GeneID; 4009965; -.
DR   KEGG; bxb:DR64_7992; -.
DR   KEGG; bxe:Bxe_C0451; -.
DR   PATRIC; fig|266265.5.peg.8216; -.
DR   eggNOG; ENOG410668V; Bacteria.
DR   eggNOG; COG3704; LUCA.
DR   HOGENOM; HOG000119264; -.
DR   KO; K03201; -.
DR   OMA; MFAQVAL; -.
DR   OrthoDB; 1488773at2; -.
DR   BioCyc; BXEN266265:BXE_RS38820-MONOMER; -.
DR   Proteomes; UP000001817; Chromosome 3.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0030255; P:protein secretion by the type IV secretion system; IEA:InterPro.
DR   InterPro; IPR007688; Conjugal_tfr_TrbL/VirB6.
DR   Pfam; PF04610; TrbL; 1.
PE   4: Predicted;
DR   PRODOM; Q13HT4.
DR   SWISS-2DPAGE; Q13HT4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     26     50       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     62     82       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    160    189       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    196    216       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    228    249       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   385 AA;  38378 MW;  77F802998E2EB4F8 CRC64;
     MSGLFTAVGG TLENGMSTYV TSVSSALSSA LVPVVTTALS IWIITYGFAV VRGEAHESVP
     AFAWRGLKVA VMLAFALGAG IYQSQVVTAV EGATTGLAQT IQTAAANAGA GNPGCGTASG
     SSVTGTSASA IYQTLDCYDR QIDLVMDAYF NKATHEGFSV AGIVAGIGDF ACGLVAALGA
     SVFLIVLAFE VVMARLLLDL VLGLGPLFIA CGAFSPTARF FEAWTAKIAN YALLQVLIAA
     FLGMALTAFS ADLAPFQVTS ASPDANASTL TAAVQGALDN AASWGAGLGM CAAGVLLATV
     GWQLPAVASG LAGGATMSGF GAFVAGYAAR QALRGVGAAM RFGHGPRGPG GKISDGGAGS
     GSIPLYQRAA REHMGDQGND GGSTS
//

If you have problems or comments...

PBIL Back to PBIL home page