(data stored in SCRATCH zone)

SWISSPROT: Q13IX3_PARXL

ID   Q13IX3_PARXL            Unreviewed;       152 AA.
AC   Q13IX3;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   08-MAY-2019, entry version 86.
DE   RecName: Full=Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476};
GN   ORFNames=Bxe_C0039 {ECO:0000313|EMBL:ABE35966.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE35966.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE35966.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE35966.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -!- FUNCTION: Transcriptional regulator. {ECO:0000256|HAMAP-
CC       Rule:MF_00476}.
CC   -!- SIMILARITY: Belongs to the transcriptional regulatory CopG/NikR
CC       family. {ECO:0000256|HAMAP-Rule:MF_00476}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation
CC       of feature annotation. {ECO:0000256|HAMAP-Rule:MF_00476}.
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DR   EMBL; CP000272; ABE35966.1; -; Genomic_DNA.
DR   RefSeq; WP_011493226.1; NZ_CP008761.1.
DR   STRING; 266265.Bxe_C0039; -.
DR   EnsemblBacteria; ABE35966; ABE35966; Bxe_C0039.
DR   GeneID; 4009827; -.
DR   KEGG; bxb:DR64_8386; -.
DR   KEGG; bxe:Bxe_C0039; -.
DR   PATRIC; fig|266265.5.peg.7818; -.
DR   eggNOG; ENOG4105MRR; Bacteria.
DR   eggNOG; COG0864; LUCA.
DR   HOGENOM; HOG000102781; -.
DR   KO; K07722; -.
DR   OMA; HLDHDNC; -.
DR   OrthoDB; 1885366at2; -.
DR   BioCyc; BXEN266265:BXE_RS36945-MONOMER; -.
DR   Proteomes; UP000001817; Chromosome 3.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0016151; F:nickel cation binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0010045; P:response to nickel cation; IEA:InterPro.
DR   Gene3D; 1.10.1220.10; -; 1.
DR   Gene3D; 3.30.70.1150; -; 1.
DR   HAMAP; MF_00476; NikR; 1.
DR   InterPro; IPR027271; Acetolactate_synth/TF_NikR_C.
DR   InterPro; IPR013321; Arc_rbn_hlx_hlx.
DR   InterPro; IPR002145; CopG.
DR   InterPro; IPR022988; Ni_resp_reg_NikR.
DR   InterPro; IPR010985; Ribbon_hlx_hlx.
DR   InterPro; IPR014864; TF_NikR_Ni-bd_C.
DR   Pfam; PF08753; NikR_C; 1.
DR   Pfam; PF01402; RHH_1; 1.
DR   SUPFAM; SSF47598; SSF47598; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q13IX3.
DR   SWISS-2DPAGE; Q13IX3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   DNA-binding {ECO:0000256|HAMAP-Rule:MF_00476,
KW   ECO:0000256|SAAS:SAAS00993492};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transcription {ECO:0000256|HAMAP-Rule:MF_00476};
KW   Transcription regulation {ECO:0000256|HAMAP-Rule:MF_00476}.
FT   DOMAIN        3     38       RHH_1. {ECO:0000259|Pfam:PF01402}.
FT   DOMAIN       53    129       NikR_C. {ECO:0000259|Pfam:PF08753}.
SQ   SEQUENCE   152 AA;  16991 MW;  F6B9EA5D8EFAE64A CRC64;
     MQRITMTIDD DLLAIVDAMV EQRGYTSRSE AFRDLVRESQ AREPAGAAGE QCVATLTYVY
     DHATRDLARR ITQAHHERHD LAVASMRVHL DHDSLLESSV LQGRSQEVAA FADSIASQRG
     VRFARLHTIP VSIERARHHH GAASGQHDHL HV
//

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