(data stored in SCRATCH zone)

SWISSPROT: Q13QL5_PARXL

ID   Q13QL5_PARXL            Unreviewed;       251 AA.
AC   Q13QL5;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   07-JUN-2017, entry version 72.
DE   SubName: Full=Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABE33624.1};
GN   ORFNames=Bxe_B2365 {ECO:0000313|EMBL:ABE33624.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE33624.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE33624.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE33624.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000271; ABE33624.1; -; Genomic_DNA.
DR   RefSeq; WP_011490985.1; NZ_CP008762.1.
DR   ProteinModelPortal; Q13QL5; -.
DR   STRING; 266265.Bxe_B2365; -.
DR   EnsemblBacteria; ABE33624; ABE33624; Bxe_B2365.
DR   GeneID; 4007139; -.
DR   KEGG; bxe:Bxe_B2365; -.
DR   PATRIC; fig|266265.5.peg.5346; -.
DR   eggNOG; ENOG4105THG; Bacteria.
DR   eggNOG; COG2186; LUCA.
DR   HOGENOM; HOG000296136; -.
DR   OMA; IESESCA; -.
DR   OrthoDB; POG091H05HE; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   CDD; cd07377; WHTH_GntR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 1.20.120.530; -; 1.
DR   InterPro; IPR011711; GntR_C.
DR   InterPro; IPR008920; TF_FadR/GntR_C.
DR   InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF07729; FCD; 1.
DR   Pfam; PF00392; GntR; 1.
DR   PRINTS; PR00035; HTHGNTR.
DR   SMART; SM00895; FCD; 1.
DR   SMART; SM00345; HTH_GNTR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF48008; SSF48008; 1.
DR   PROSITE; PS50949; HTH_GNTR; 1.
PE   4: Predicted;
DR   PRODOM; Q13QL5.
DR   SWISS-2DPAGE; Q13QL5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00307,
KW   ECO:0000256|SAAS:SAAS00145206};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00307,
KW   ECO:0000256|SAAS:SAAS00145490};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00307,
KW   ECO:0000256|SAAS:SAAS00145675}.
FT   DOMAIN       11     79       HTH gntR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50949}.
FT   DNA_BIND     39     58       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00307}.
SQ   SEQUENCE   251 AA;  28203 MW;  72255B666022957C CRC64;
     MQLTPPATRE STSRSELVGK MLAFFKERGY ESGERLPSER ALAERFGVGR NALREALSTL
     SALRVIESRP NSGIYLRRMS TDSSFETIVM LTEMGSEPSM KEVKETLEVR WALEMRTVQL
     ACERRTEGDL DSLASVIDAT QAVLSNKGNI SVQDTAFHMA LARCTHNEVL VRLLNSFYRI
     SESRRFALFA DPERGEISAV QHAKLYEAVK KRDVKKAIAL METHFSRAVE AWNEILGEEP
     VSGTKRTGKT K
//

If you have problems or comments...

PBIL Back to PBIL home page