(data stored in SCRATCH zone)

SWISSPROT: Q13QP0_PARXL

ID   Q13QP0_PARXL            Unreviewed;       323 AA.
AC   Q13QP0;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   05-JUL-2017, entry version 75.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABE33599.1};
GN   ORFNames=Bxe_B2390 {ECO:0000313|EMBL:ABE33599.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE33599.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE33599.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE33599.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000271; ABE33599.1; -; Genomic_DNA.
DR   ProteinModelPortal; Q13QP0; -.
DR   STRING; 266265.Bxe_B2390; -.
DR   DNASU; 4007114; -.
DR   EnsemblBacteria; ABE33599; ABE33599; Bxe_B2390.
DR   KEGG; bxe:Bxe_B2390; -.
DR   PATRIC; fig|266265.5.peg.5318; -.
DR   eggNOG; ENOG4105EYJ; Bacteria.
DR   eggNOG; ENOG410XRQ1; LUCA.
DR   HOGENOM; HOG000233519; -.
DR   OMA; HPPLNVR; -.
DR   OrthoDB; POG091H057E; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   4: Predicted;
DR   PRODOM; Q13QP0.
DR   SWISS-2DPAGE; Q13QP0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661574};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661597};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661673}.
FT   DOMAIN       19     76       HTH lysR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50931}.
FT   DNA_BIND     36     55       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00253}.
SQ   SEQUENCE   323 AA;  35059 MW;  D0FF5D3603ACBB01 CRC64;
     MQAGVALIAT KLPMGPHMDK FLAIKTLLEV ADAGGFSKAA QRLGVATSSV TRLMDSLEAS
     LGTALLTRTP RKVSLTDAGI AYVEQVAKVL DDLAEADESV FDSGASPVGA LRISVPSTYS
     RLCLAPHLAA FLCENPRVFL DVVVADHFAD LALDRIDVAI RIGLADRDAS LIVKKLADNP
     RYVVASHDYL ERSGTPQTPQ DLADHECLRF AYGGGYRTHQ TWTFQREGAG QRVDVRGHLL
     SNNLDILLEA VMAGRGIALL PEWQVEADIR AGRLLRLFEH FDASPQAGDA VVYAAYLPNR
     RQSSKVRALV QFLETRLRGA LEG
//

If you have problems or comments...

PBIL Back to PBIL home page