(data stored in SCRATCH zone)

SWISSPROT: Q13QZ9_PARXL

ID   Q13QZ9_PARXL            Unreviewed;       308 AA.
AC   Q13QZ9;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   07-JUN-2017, entry version 75.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABE33490.1};
GN   ORFNames=Bxe_B2501 {ECO:0000313|EMBL:ABE33490.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE33490.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE33490.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE33490.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000271; ABE33490.1; -; Genomic_DNA.
DR   RefSeq; WP_011490858.1; NZ_CP008762.1.
DR   ProteinModelPortal; Q13QZ9; -.
DR   STRING; 266265.Bxe_B2501; -.
DR   EnsemblBacteria; ABE33490; ABE33490; Bxe_B2501.
DR   GeneID; 4007003; -.
DR   KEGG; bxb:DR64_4828; -.
DR   KEGG; bxe:Bxe_B2501; -.
DR   PATRIC; fig|266265.5.peg.5205; -.
DR   eggNOG; ENOG4105HNQ; Bacteria.
DR   eggNOG; ENOG410XSIF; LUCA.
DR   HOGENOM; HOG000233514; -.
DR   KO; K13794; -.
DR   OMA; LYKYALQ; -.
DR   OrthoDB; POG091H0LZE; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   4: Predicted;
DR   PRODOM; Q13QZ9.
DR   SWISS-2DPAGE; Q13QZ9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661574};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661597};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661673}.
FT   DOMAIN        1     58       HTH lysR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50931}.
FT   DNA_BIND     18     37       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00253}.
SQ   SEQUENCE   308 AA;  33018 MW;  9F7F9C6B6700DE92 CRC64;
     MELRQLRYFI KVAEHGSMGR AAADLGVVTS ALSQQISRLE GELAARLLTR TATGVTPTDA
     GIAFLRQAQL ALRHADSAAH AARQARLTGH VSVGMAATTA SVLAMPFLRA MRERYPDVRV
     HLVEALSGHL SSMLNSRRLD LAVLFRSEAA QRWSVLPLID ERLFLIAKPG MKGLPAAGPV
     RLRDLAGLSF VLPSSSHGLR ALLDAAFVRA RVTPEVSVEI DGLSVLMDLV QDGFGATIQP
     GAATARLSGQ PLEVREIRDR FLHRPNLLVS LSDDELSPAA LAARVLLSRV ASAQVTSGNW
     PGATLHES
//

If you have problems or comments...

PBIL Back to PBIL home page