(data stored in SCRATCH zone)

SWISSPROT: Q13RH0_PARXL

ID   Q13RH0_PARXL            Unreviewed;       294 AA.
AC   Q13RH0;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   30-AUG-2017, entry version 75.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABE33319.1};
GN   ORFNames=Bxe_B2674 {ECO:0000313|EMBL:ABE33319.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE33319.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE33319.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE33319.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000271; ABE33319.1; -; Genomic_DNA.
DR   RefSeq; WP_011490688.1; NZ_CP008762.1.
DR   ProteinModelPortal; Q13RH0; -.
DR   STRING; 266265.Bxe_B2674; -.
DR   DNASU; 4006610; -.
DR   EnsemblBacteria; ABE33319; ABE33319; Bxe_B2674.
DR   KEGG; bxe:Bxe_B2674; -.
DR   PATRIC; fig|266265.5.peg.5026; -.
DR   eggNOG; ENOG4107NQ8; Bacteria.
DR   eggNOG; ENOG410XR9D; LUCA.
DR   HOGENOM; HOG000233517; -.
DR   OMA; WRIVCTC; -.
DR   OrthoDB; POG091H0674; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   4: Predicted;
DR   PRODOM; Q13RH0.
DR   SWISS-2DPAGE; Q13RH0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661574};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661597};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661673}.
FT   DOMAIN       14     71       HTH lysR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50931}.
FT   DNA_BIND     31     50       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00253}.
SQ   SEQUENCE   294 AA;  32074 MW;  99380A20BEFBF242 CRC64;
     MADRSGPNIL SLSLEIDLLR SFIVVAEVRA LSRAASRIGR TQSALSQQMK RLEEIVEQPL
     FQRTGRGVVL TNPGERLLIH AQRILRLHDE AMADLSGKGL SGTIRFGCPD DYAAVFLPHL
     LRQFSSQHPH ALVEVVCAPT PRLLEQLEMH ALDLAMISLP ENAADDDIIR REPLVWVGCP
     GMDSAHFDPL PLAVSDPDTL DHVAACEALQ RAGRAYRIAY ASSSLAGLTA LVRSGQAFAV
     ITQTAVAPDL HILNADAALP PLPTIGITLK FERKRPSHLV TVFAEHIRLT LPLL
//

If you have problems or comments...

PBIL Back to PBIL home page